Transcript Information: R_Transcript_333219.p1


Annotated TAIR IDAT3G63370.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)OTP86
Annotation TypeOrtholog
Chromosome Positionchr3:23402080-23405180 | Forward length=884
E-Value1.1E-300
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.36505921909437
Replicate 20.22231376911374
Replicate 30.13474551527149
Condition 2: 8 Hour
Replicate 10.23045519950348
Replicate 20.34198995757107
Replicate 30.25625803228782
Condition 3: 24 Hour
Replicate 10.32411021968524
Replicate 20.077842090202038
Replicate 30.41200385292983


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_333219.p1 GENE.R_Transcript_333219~~R_Transcript_333219.p1 ORF type:5prime_partial len:850 (+),score=174.70,PPR|PF01535.16|0.027,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|0.41,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|0.023,PPR|PF01535.16|7.2e-07,PPR|PF01535.16|0.85,PPR|PF01535.16|0.012,PPR|PF01535.16|0.13,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|13,PPR|PF01535.16|0.00015,PPR|PF01535.16|3.7,PPR|PF01535.16|0.79,PPR|PF01535.16|9.8e+03,PPR|PF01535.16|0.31,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|7.9,PPR_2|PF13041.2|3.8e-09,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|49,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|3.7,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|15,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|6.2e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|0.00036,PPR_3|PF13812.2|96,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.0083,DYW_deaminase|PF14432.2|9.7e-45,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|7.3,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|5.8e+03,PPR_1|PF12854.3|3.8,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.076,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|9.6e+02,PPR_1|PF12854.3|1.3e+03 R_Transcript_333219:3-2552(+)
CAGGTAGATTTTGTGTTTTTGAGGACTAAGCTTTTGTTTATGTATGGGAAATGTGGGTCAATTTCGGATGCTCAGAAGATGTTCGATGAAATGCCTGAAAGAAGTATTTTTTCTTGGAATGCTATGATTGGTGCTTATGTTTCTAATGGGCAGCCATGGCAAGCAGTTATCTTGTACCGCGAAATGCGGGCTTTGGGAGTGAATGCTGATGCTTTCACTTTCCCTTCAATACTTAAAGCTTGTGGCTTGGTTGGTGACATTAGGCTAGGGACTGAAATACATGGTTATGCCTTTAAATCTGGGTGTCATTCTAATGGTTTTGTTGTGAATGCCCTTGTTAGTATGTATGCCAAGTGTGAGAATATTGTTGGTGCTAGGCTGTTATTTGACAGAATTCAAGAAAGAGATGATGTTGTGCTATGGAATTCAATCATTTCAGGTTATGCTGCTGGTGGGGAGCCTGTTGAAGCACTAGCTCTTTGCAGGGAAATGCAGAAGGGTGGTGTTTGTATGAATACATATACTTTTGTCTCTGCACTGCAAGCTTGTGAGGAGCCATCATTTAGGAGATCGGGGATGGAGATTCATGCTATGATTTTGAAGTCGAATGATCATTTGCATGTTTATGTGGCAAATGCTTTGCTTGTTATGTATGCAAGGTGTGGTAGAATAAGAGAAGCTTCTCAAATATTTTGTACAATGATTGATAAGGATAGCATATCATGGAATTCTATGCTGTCCGGCTTAGTCCAGAATGGTCTTTATAATGAAGCTCGTCAATGCTTTGGTGAAATGTTGGCAGCAGGACAGAGACCTGATCAGGCTTCTTTGATCAGTATCCTTGGGGCTTCTGCAAGATTGGAGAAGTTGCTGTATGGAATGGAAGCTCATGCTTTTGCCATAAAAACTGGATCAGATGTTGATATTCAGGTTGCAAATTCATTAATAGATATGTATGCGAAGTGTTGCCTTGTGAAATATATGGAACATGTTTTTGGAAACATGCTCAATAAAGATGTTATTTCTTGGACGACAGCTATCGCAGGCTATGCTCAAAGCAATTGTCATGTAGAAGCCTTGAATGTGTTCCTGGAAGCACAGGCTGAAGGGGTCCAGGAGATTGATGCCATGATGATTGGAAGTGTTTTGCTCGCTTGCACTTCCTTGAAACAAATTAACCACGTAAAAGAGACACATGGTTATATATTAAGGAGGGGGCTGTCTGATTTAGTGCTAAGCAATACCCTTGTGGATGCATATGGGGAGTGTGGCGACATAGCAATGGCATGTAGGGTGTTTGAATTGATTGAAAACAAAGATGTGGTCTCTTGGACGAGCATGATTTCTGCTTATGTCGATACTGGGCTTGGTAATGAGGCTCTTAGCCTTTTCCGTTCAATGAAGAAGAATGGAGTTGAACCTGATGCAGTGGCATTAGTCAGCTTACTCTCAGCTGCAGCCAGCCTCTCAATCTTGAAGAAAGGTAAAGAAATTCATGGATATTTAGTCAGGCAAGGTTTTGTTCTGGAAGGATCCATTGCTAGCTCGCTTGTTGATATGTATGCACGATGTGGGACTCCAGAGAACTCATCCAAGGTGTTTGATCTTGTGAAGGATAAAGATACTGTTCTATGGACTTGTATGATCCATGCAAGTGGAATGCATGGCAATGGCAAGATGGCAATCAAATTGTTTAATAAGATGGAGATGGAAAATATTTGTCCAGACCATGTTACCTTCTTGGCAATTCTTTATGCATGTAGCCACTCAGGAATGACAGATGAAGGTCAAAGATACATGGATATTATGAGACATAAATATAACTTAGAGCCATGGCCTGAACATTATGCTTGTGTGGTTGACCTCCTAGGCAGAGCAAATCGCCTGGAAGAGGCATTTAAGTTTGTCAAAAGCATGCCTGTCGAGCCAAATGCTGTTGTCTGGAGTGCTCTTCTTGGAGCCTGCCACGTACACTCCAATGAGGAATTGGGTGATATTGCAGCCAGGAACTTGTTGAGCTTAGAACCCGAAAATCCAGGGAACTATGTGCTCGTATCTAATGCATTTGCTGCCACAGGAAGATGGGATGACGTTGAGCAAGTACGTGAGAGAATGAGGGAAAGGGGGTTGAAGAAAAGCCCAGCTTGCAGTTGGATAGAGATTAGTGACCAGGTCCATACATTTATGGCAAGGGACAAGTCCCATCCACAGAATGACCAAATATATGAAAAATTAGACCAAGTTATTGATATATTATCAAAGAAAGGAGGTTACACTGCTCAGACTAAGTACGTTTTGCATAATGTGGAGGAAGAAGAGAAGACAAAGATGTTGTATGGTCATAGTGAGAGGTTAGCAATCGCATATGGCCTTCTAAAAACGCCTGCAGGAGCTCCTATTCGAGTCACTAAGAACCTTCGTGTCTGTGGCGATTGCCATGTCTTCATAAAATTAGTGTCCAAGTTCTTCGAAAGAGAAATCATAGTTAGAGATGCTACTAGATTTCACCATTTTCATCAAGGAAGTTGCTCCTGCAAGGATTTCTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_333219.p1 GENE.R_Transcript_333219~~R_Transcript_333219.p1 ORF type:5prime_partial len:850 (+),score=174.70,PPR|PF01535.16|0.027,PPR|PF01535.16|2.1e-06,PPR|PF01535.16|0.41,PPR|PF01535.16|7.8e-06,PPR|PF01535.16|0.023,PPR|PF01535.16|7.2e-07,PPR|PF01535.16|0.85,PPR|PF01535.16|0.012,PPR|PF01535.16|0.13,PPR|PF01535.16|1.8e-08,PPR|PF01535.16|13,PPR|PF01535.16|0.00015,PPR|PF01535.16|3.7,PPR|PF01535.16|0.79,PPR|PF01535.16|9.8e+03,PPR|PF01535.16|0.31,PPR_2|PF13041.2|0.29,PPR_2|PF13041.2|1.7e-08,PPR_2|PF13041.2|7.9,PPR_2|PF13041.2|3.8e-09,PPR_2|PF13041.2|0.3,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|49,PPR_2|PF13041.2|0.13,PPR_2|PF13041.2|3.7,PPR_2|PF13041.2|2.1e-11,PPR_2|PF13041.2|1.1e-07,PPR_2|PF13041.2|0.33,PPR_2|PF13041.2|15,PPR_3|PF13812.2|2.8,PPR_3|PF13812.2|0.00031,PPR_3|PF13812.2|4.2e+03,PPR_3|PF13812.2|2.2e+02,PPR_3|PF13812.2|0.029,PPR_3|PF13812.2|3.4,PPR_3|PF13812.2|0.027,PPR_3|PF13812.2|6.2e+02,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.089,PPR_3|PF13812.2|0.00036,PPR_3|PF13812.2|96,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|2.6,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.0083,DYW_deaminase|PF14432.2|9.7e-45,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|7.3,PPR_1|PF12854.3|3.1e+03,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.015,PPR_1|PF12854.3|9.1,PPR_1|PF12854.3|0.021,PPR_1|PF12854.3|5.8e+03,PPR_1|PF12854.3|3.8,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|0.076,PPR_1|PF12854.3|3.5e+03,PPR_1|PF12854.3|1.1,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|0.13,PPR_1|PF12854.3|9.6e+02,PPR_1|PF12854.3|1.3e+03 R_Transcript_333219:3-2552(+)
QVDFVFLRTKLLFMYGKCGSISDAQKMFDEMPERSIFSWNAMIGAYVSNGQPWQAVILYREMRALGVNADAFTFPSILKACGLVGDIRLGTEIHGYAFKSGCHSNGFVVNALVSMYAKCENIVGARLLFDRIQERDDVVLWNSIISGYAAGGEPVEALALCREMQKGGVCMNTYTFVSALQACEEPSFRRSGMEIHAMILKSNDHLHVYVANALLVMYARCGRIREASQIFCTMIDKDSISWNSMLSGLVQNGLYNEARQCFGEMLAAGQRPDQASLISILGASARLEKLLYGMEAHAFAIKTGSDVDIQVANSLIDMYAKCCLVKYMEHVFGNMLNKDVISWTTAIAGYAQSNCHVEALNVFLEAQAEGVQEIDAMMIGSVLLACTSLKQINHVKETHGYILRRGLSDLVLSNTLVDAYGECGDIAMACRVFELIENKDVVSWTSMISAYVDTGLGNEALSLFRSMKKNGVEPDAVALVSLLSAAASLSILKKGKEIHGYLVRQGFVLEGSIASSLVDMYARCGTPENSSKVFDLVKDKDTVLWTCMIHASGMHGNGKMAIKLFNKMEMENICPDHVTFLAILYACSHSGMTDEGQRYMDIMRHKYNLEPWPEHYACVVDLLGRANRLEEAFKFVKSMPVEPNAVVWSALLGACHVHSNEELGDIAARNLLSLEPENPGNYVLVSNAFAATGRWDDVEQVRERMRERGLKKSPACSWIEISDQVHTFMARDKSHPQNDQIYEKLDQVIDILSKKGGYTAQTKYVLHNVEEEEKTKMLYGHSERLAIAYGLLKTPAGAPIRVTKNLRVCGDCHVFIKLVSKFFEREIIVRDATRFHHFHQGSCSCKDFW*

Click here to download the sequence:
Link to NCBI Protein BLAST