Transcript Information: R_Transcript_33328.p1


Annotated TAIR IDAT3G18480.1
Annotated Gene NameCCAAT-displacement protein alternatively spliced product
Annotated Gene Symbol(s)AtCASP, CASP
Annotation TypeOrtholog
Chromosome Positionchr3:6336924-6341596 | Forward length=689
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.599766168599
Replicate 220.38147463544
Replicate 327.266731574922
Condition 2: 8 Hour
Replicate 120.721566529294
Replicate 224.554409049618
Replicate 330.828504128329
Condition 3: 24 Hour
Replicate 130.319095343176
Replicate 226.608394327724
Replicate 328.777684932407


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33328.p1 GENE.R_Transcript_33328~~R_Transcript_33328.p1 ORF type:complete len:683 (+),score=192.17,CASP_C|PF08172.8|2.2e+03,CASP_C|PF08172.8|18,CASP_C|PF08172.8|4.2e+02,CASP_C|PF08172.8|1.6e+04,CASP_C|PF08172.8|6.7e-66 R_Transcript_33328:325-2373(+)
ATGGAGGTTCCACAAGGTGGAGGAGGAGAGAGAGAGAAATCGACCTCTTCCACTGCATCTCCAGTCTCCGTTGTCGCCAATTTCTGGAAAGAATTCGATTTGGAAAAGGAAAGGAGCTTATTAGATGAGCAAGGGCTTCGTATAGCGGAAAACCAGGAGAACAGCCAAAAGAATCGACGTAAACTTGCTGAGAGCACTCGAGATTTTAAGAAAGCTTCACCGGAGGATAAGTTGAGTTTGTTTAATTCGTTGCTCAAAGGATATCAGGAAGAGGTCGATAACCTTACTAAAAGAGCGAAATTTGGTGAAAATGCATTTCTTAATATATATCAGAAACTCTATGAGGCTCCAGATCCTTATCCAGCTCTTGCCTCAATCGCTGAGCAAGACATGAAAATCTCTGAACTTGAGTCAGATAACCGGAAGATGAAACTTGAGCTTGAAGAATTTAGAGCTGAAGCAGCACATTTGAAAAATCAACAAGCAACCATAAGGAGAATGGAAGAACGCAATCGCCAATTAGAACAACAGATGGAGGAAAAAGTGAAAGAAATAGTGGAGATCAAGCAGCGCAGTTTAGCAGAGGAGAACCAAAAGACAATGGATGTGTTAAAAGAACGAGAGCAATCACTGCAGGACCAGTTGCGTCAAGCTAAAGAAAGTGTTACAACTATGCAAAAGTTGCATGAACTTGCACAGAGCCAGTTGTTTGAGCTTCGTGCTCAGTCAGAGGAAGAGAGGGCTGCAAAGCAATCAGAGCTTACCCTTTTGATGGATGAAGTTGAACGGGCTCAAAGCCGACTTTTGAGTCTGGAGAGGGAGAAGGGACTACTACGTTCTCAGCTACAGTCTGCGAATGAGGAGAGTGATACTAAGAAAAGTGATACTTTTGATTCAAGCACCATTCTTGAGAACTCTTTGAGTGCAAAGGAGAAGATTATCTCTGAACTGAATATGGAACTTCATAATGTTGAGACAACCTTGTCTAATGAGAGGGAGCAACATATTAATGAAATTAAGAAACTGAATGCACTTCTCAATGAAAAGGAAAGTGCCCTTGAGGAGTTGCGAAAAGATCTGCATGCTCGTCCAACAGCAAAATTAGTTGAAGATCTCCGTAAAAAAGTTAAAATTCTGCAGGCAGTGGGTTACAACTCCATCGAGGCTGAAGATTGGGAAGTAGCTACTACTGGGGAAGAAATGAGCAAATTGGAATCATTATTGCTTGACAAGAACAGAAAAATGGAGCATGAACTCACACAATTGAAGGTCAAATTGTCTGAGAAGACATCATTGCTTGAGGCTGCAGAATCAAAGGCATCAGAACTTACTGCTAAGGTTGATGAACAGAAAAGGTTAATTCAGAAGCTTGAGGACGATATATTGAAGGGTTATAGCTCGAAAGAGCGAAGATCATCTTTATTTCATGATTGGGATCTATCAGAGTCTGTTTCAGCTGAGGCATCTGAGAGTGCAGAACAGAAACATATTTCTGCTGATCAGGATCAAAGTTCAATGCTGAAGGTGATTTGTAATCAGAGAGATCGATTCCGAGCTCGGCTTCGAGAGACTGAAGAAGAAATAAGGCAGCTCAAGGATAAGATCCGGGCACTGACAGATGAATTGGAAAAAACAAAGGCTGACAATGTGAAGCTTTATGGGAAAATTCGTTATGTCCAAGATTACAATCATGAGAAAGTAGTTTCTAGGGCATCAAAAAGGAGTACTGATGATCTAGAAAGTGGCTTCAGCTCTGATGTTGAGTCCAAGTATAAGAAGATGTATGAAGAGGATATAAATCCATTTGCTGCTTTCTCCAAAAAGGAGCGGGATCAAAGGTACAAGGAGCTTGGTCTGAGGGATAAAATTACACTGACCAGTGGTCGCTTCCTTCTTGGCAACAAATATGCTCGTACTTTTGCATTCTTCTACACAATTGGTTTGCATATTCTGGTCTTCACCTGTTTGTACAGAATGTCTGCCTTGAGCCATCTAAGTCATGGCTCTGAAGAAGTTGCTGAACAAACCATTCTGCCTCGCGGACTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33328.p1 GENE.R_Transcript_33328~~R_Transcript_33328.p1 ORF type:complete len:683 (+),score=192.17,CASP_C|PF08172.8|2.2e+03,CASP_C|PF08172.8|18,CASP_C|PF08172.8|4.2e+02,CASP_C|PF08172.8|1.6e+04,CASP_C|PF08172.8|6.7e-66 R_Transcript_33328:325-2373(+)
MEVPQGGGGEREKSTSSTASPVSVVANFWKEFDLEKERSLLDEQGLRIAENQENSQKNRRKLAESTRDFKKASPEDKLSLFNSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALASIAEQDMKISELESDNRKMKLELEEFRAEAAHLKNQQATIRRMEERNRQLEQQMEEKVKEIVEIKQRSLAEENQKTMDVLKEREQSLQDQLRQAKESVTTMQKLHELAQSQLFELRAQSEEERAAKQSELTLLMDEVERAQSRLLSLEREKGLLRSQLQSANEESDTKKSDTFDSSTILENSLSAKEKIISELNMELHNVETTLSNEREQHINEIKKLNALLNEKESALEELRKDLHARPTAKLVEDLRKKVKILQAVGYNSIEAEDWEVATTGEEMSKLESLLLDKNRKMEHELTQLKVKLSEKTSLLEAAESKASELTAKVDEQKRLIQKLEDDILKGYSSKERRSSLFHDWDLSESVSAEASESAEQKHISADQDQSSMLKVICNQRDRFRARLRETEEEIRQLKDKIRALTDELEKTKADNVKLYGKIRYVQDYNHEKVVSRASKRSTDDLESGFSSDVESKYKKMYEEDINPFAAFSKKERDQRYKELGLRDKITLTSGRFLLGNKYARTFAFFYTIGLHILVFTCLYRMSALSHLSHGSEEVAEQTILPRGL*

Click here to download the sequence:
Link to NCBI Protein BLAST