Transcript Information: R_Transcript_33335.p1


Annotated TAIR IDAT5G04430.2
Annotated Gene Namebinding to TOMV RNA 1L (long form)
Annotated Gene Symbol(s)BTR1, BTR1L
Annotation TypeOrtholog
Chromosome Positionchr5:1250602-1253523 | Reverse length=334
E-Value2.1E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 143.665210481783
Replicate 230.863819693216
Replicate 338.852417124216
Condition 2: 8 Hour
Replicate 135.128131337744
Replicate 234.370966787688
Replicate 340.472319086446
Condition 3: 24 Hour
Replicate 151.756470004506
Replicate 250.656955049029
Replicate 350.581480089155


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33335.p1 GENE.R_Transcript_33335~~R_Transcript_33335.p1 ORF type:complete len:283 (+),score=63.79,KH_1|PF00013.25|7.2e-14,KH_1|PF00013.25|5.8e-13,KH_1|PF00013.25|2.4e-13,KH_3|PF13014.2|4.6e-11,KH_3|PF13014.2|7.2e+03,KH_3|PF13014.2|1.9e-06,KH_3|PF13014.2|2.4e-09,KH_2|PF07650.13|0.0021,KH_2|PF07650.13|0.078,KH_2|PF07650.13|0.0016,KH_4|PF13083.2|1.6,KH_4|PF13083.2|0.0082,KH_4|PF13083.2|0.017 R_Transcript_33335:232-1080(+)
ATGGAGAAGCCTACATATGTCAAGTTCCTTGTGTCAAATGCTTCCGCTGGTTCAGTTATTGGCAAAGGTGGCTCCACAATAACAGATTTTCAAAAGGACTCTGGAGCACGGATTCAGTTATCCCGTAATCATGAGTTTTTCCCGGGAACTGCTGATAGAATTATTATGGTATCTGGAAAGATTGAGGATGTACTGAAGGCAGTGGACCTTATCCTTAATAAACTGCTTACTGAGATCCAATCTGAAGATGGTGATGATGCTGAGCAAAGATCCAAAGTTCGACTTATAGTTCCGAACAGCTGTTGTGGTGCCATTATTGGCAAGAGTGGAGCAACTATCAAGTCATTTATTGGAGATTCTCGAGCTGGCATAAAGATATCACCCCAAGATAACAATTATATTGGCTTGAGTGACCGGGTTGTGACACTGACAGGTTCTTTTGAGGAACAGATGCGTGCTATTGATCTGATTTTGTCAAAGCTAACTGAAGACCCCCTTTACTTGCAGTCAATGAATGCCCCACTTTCATATCCAGTTGGAACAACAGCATACAACACAAACTATGGACCAAATGGGGTTGGAGGAAGATATCCGAATAATAAGGAAGATCGTAATAACTCTTTGACAATTGGTGTTGCTGATGAACATATTGGTGTGGTGGTTGGACGTGGTGGAAGGAACATACTGGAGATTAGTCAGGTTAGTGGAGCAAGGATAAAGATATCAGACAGGGGTGATTTCATGTCTGGTACATCAAACAGGAAAGTCACGATTACAGGGTCTCTTAGAGCAATACGAGCAGCTGAGGCCATGATTAATCAGAAGGTTGCCTCTGTTACGGAGAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33335.p1 GENE.R_Transcript_33335~~R_Transcript_33335.p1 ORF type:complete len:283 (+),score=63.79,KH_1|PF00013.25|7.2e-14,KH_1|PF00013.25|5.8e-13,KH_1|PF00013.25|2.4e-13,KH_3|PF13014.2|4.6e-11,KH_3|PF13014.2|7.2e+03,KH_3|PF13014.2|1.9e-06,KH_3|PF13014.2|2.4e-09,KH_2|PF07650.13|0.0021,KH_2|PF07650.13|0.078,KH_2|PF07650.13|0.0016,KH_4|PF13083.2|1.6,KH_4|PF13083.2|0.0082,KH_4|PF13083.2|0.017 R_Transcript_33335:232-1080(+)
MEKPTYVKFLVSNASAGSVIGKGGSTITDFQKDSGARIQLSRNHEFFPGTADRIIMVSGKIEDVLKAVDLILNKLLTEIQSEDGDDAEQRSKVRLIVPNSCCGAIIGKSGATIKSFIGDSRAGIKISPQDNNYIGLSDRVVTLTGSFEEQMRAIDLILSKLTEDPLYLQSMNAPLSYPVGTTAYNTNYGPNGVGGRYPNNKEDRNNSLTIGVADEHIGVVVGRGGRNILEISQVSGARIKISDRGDFMSGTSNRKVTITGSLRAIRAAEAMINQKVASVTES*

Click here to download the sequence:
Link to NCBI Protein BLAST