Transcript Information: R_Transcript_33337.p1


Annotated TAIR IDAT5G04430.2
Annotated Gene Namebinding to TOMV RNA 1L (long form)
Annotated Gene Symbol(s)BTR1, BTR1L
Annotation TypeOrtholog
Chromosome Positionchr5:1250602-1253523 | Reverse length=334
E-Value2.6E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 136.809127240911
Replicate 225.111854318496
Replicate 332.876115088166
Condition 2: 8 Hour
Replicate 130.749690863982
Replicate 238.630094875138
Replicate 341.610004412183
Condition 3: 24 Hour
Replicate 149.652931911081
Replicate 246.088896485625
Replicate 349.011006508202


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33337.p1 GENE.R_Transcript_33337~~R_Transcript_33337.p1 ORF type:complete len:301 (+),score=70.30,KH_1|PF00013.25|1.9e-13,KH_1|PF00013.25|6.4e-13,KH_1|PF00013.25|2.7e-13,KH_3|PF13014.2|1.7e-11,KH_3|PF13014.2|7.7e+03,KH_3|PF13014.2|2.1e-06,KH_3|PF13014.2|2.7e-09,KH_2|PF07650.13|0.0028,KH_2|PF07650.13|0.088,KH_2|PF07650.13|0.0018,KH_4|PF13083.2|1.8,KH_4|PF13083.2|0.0091,KH_4|PF13083.2|0.019 R_Transcript_33337:245-1147(+)
ATGGAGAAGCCTACATATGTCAAGTTCCTTGTGTCAAATGCTTCCGCTGGTTCAGTTATTGGCAAAGGTGGCTCCACAATAACAGATTTTCAAAAGGACTCTGGAGCACGGATTCAGTTATCCCGTAATCATGAATTTTTCCCGGGAACAGCTGATAGAATTATTATGATATCTGGCAAGATTGAGGATTTACTGAAGGCAGTGGACCTTATCCTTAATAAACTGCTTACTGAGATCCAATCTGAAGATGGTGATGATGCTGAGCAAAGATCCAAAGTTCGACTTATAGTTCCGAACAGCTGTTGTGGTGCCATTATTGGCAAGAGTGGAGCAACTATCAAGTCATTTATTGGAGATTCTCGAGCTGGCATAAAGATATCACCCCAAGATAACAATTATATTGGCTTGAGTGACCGGGTTGTGACACTGACAGGTTCTTTTGAGGAACAGATGCGTGCTATTGATCTGATTTTGTCAAAGCTAACTGAAGACCCCCTTTACTTGCAGTCAATGAATGCCCCACTTTCATATCCAGGTGTTTTGTTTGCTGGTTTTCACCGTGTGCCATATCCATATGTGCTTCCTCCAGTTGGAACAACAGCATACAACACAAACTATGGACCAAATGGGGTTGGAGGAAGATATCCGAATAATAAGGAAGATCGTAATAACTCTTTGACAATTGGTGTTGCTGATGAACATATTGGTGTGGTGGTTGGACGTGGTGGAAGGAACATACTGGAGATTAGTCAGGTTAGTGGAGCAAGGATAAAGATATCAGACAGGGGTGATTTCATGTCTGGTACATCAAACAGGAAAGTCACGATTACAGGGTCTCTTAGAGCAATACGAGCAGCTGAGGCCATGATCAATCAGAAGGTTGCTTCTGTTACGGAGAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33337.p1 GENE.R_Transcript_33337~~R_Transcript_33337.p1 ORF type:complete len:301 (+),score=70.30,KH_1|PF00013.25|1.9e-13,KH_1|PF00013.25|6.4e-13,KH_1|PF00013.25|2.7e-13,KH_3|PF13014.2|1.7e-11,KH_3|PF13014.2|7.7e+03,KH_3|PF13014.2|2.1e-06,KH_3|PF13014.2|2.7e-09,KH_2|PF07650.13|0.0028,KH_2|PF07650.13|0.088,KH_2|PF07650.13|0.0018,KH_4|PF13083.2|1.8,KH_4|PF13083.2|0.0091,KH_4|PF13083.2|0.019 R_Transcript_33337:245-1147(+)
MEKPTYVKFLVSNASAGSVIGKGGSTITDFQKDSGARIQLSRNHEFFPGTADRIIMISGKIEDLLKAVDLILNKLLTEIQSEDGDDAEQRSKVRLIVPNSCCGAIIGKSGATIKSFIGDSRAGIKISPQDNNYIGLSDRVVTLTGSFEEQMRAIDLILSKLTEDPLYLQSMNAPLSYPGVLFAGFHRVPYPYVLPPVGTTAYNTNYGPNGVGGRYPNNKEDRNNSLTIGVADEHIGVVVGRGGRNILEISQVSGARIKISDRGDFMSGTSNRKVTITGSLRAIRAAEAMINQKVASVTER*

Click here to download the sequence:
Link to NCBI Protein BLAST