Transcript Information: R_Transcript_333511.p1


Annotated TAIR IDAT1G72500.1
Annotated Gene NameLOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: von Willebrand factor, type A (InterPro:IPR002035); BEST Arabidopsis thaliana protein match is: inter-alpha-trypsin inhibitor heavy chain-related (TAIR:AT1G19110.1); Has 1407 Blast hits to 1406 proteins in 307 species: Archae - 6; Bacteria - 522; Metazoa - 484; Fungi - 59; Plants - 110; Viruses - 0; Other Eukaryotes - 226 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:27295336-27298556 | Reverse length=756
E-Value1.3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.55870091697933
Condition 2: 8 Hour
Replicate 10.29860810911275
Replicate 20
Replicate 30.66408331538001
Condition 3: 24 Hour
Replicate 10.55994651774888
Replicate 21.0758662873452
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_333511.p1 GENE.R_Transcript_333511~~R_Transcript_333511.p1 ORF type:5prime_partial len:82 (+),score=10.19 R_Transcript_333511:1-246(+)
AACCAAAGCTACTTAATGACTTTTATTTTTCTCATAACTGATGGTGCTGTTGAAAATGAAAGAGATATTTGTAAGATTGTTAAAGATTGTTGCACTAGAAAAGCTGGATTACCTTCTCTTCGTATGTCTACCTTTGGCATAGGTTCATATTGTAATCACTACTTCCTGCGACTGCTAGCACAGATTGGGAGGGGCTATTATGATGTTGCTTATGAAGCAGACTTACATGAAAGAAGTTGTGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_333511.p1 GENE.R_Transcript_333511~~R_Transcript_333511.p1 ORF type:5prime_partial len:82 (+),score=10.19 R_Transcript_333511:1-246(+)
NQSYLMTFIFLITDGAVENERDICKIVKDCCTRKAGLPSLRMSTFGIGSYCNHYFLRLLAQIGRGYYDVAYEADLHERSCG*

Click here to download the sequence:
Link to NCBI Protein BLAST