Transcript Information: R_Transcript_333589.p1


Annotated TAIR IDAT3G47110.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:17347103-17350296 | Reverse length=1025
E-Value2E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.032653655390821
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.069551732009909
Replicate 30.028229565506045
Condition 3: 24 Hour
Replicate 10.035704210307471
Replicate 20
Replicate 30.03403997618491


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_333589.p1 GENE.R_Transcript_333589~~R_Transcript_333589.p1 ORF type:complete len:643 (-),score=85.42,LRR_8|PF13855.2|0.12,LRR_8|PF13855.2|0.0039,LRR_8|PF13855.2|3e-06,LRR_8|PF13855.2|0.00022,LRR_8|PF13855.2|5.4e-05,LRR_8|PF13855.2|9e-06,LRR_8|PF13855.2|0.0055,LRR_8|PF13855.2|0.33,LRR_8|PF13855.2|1.5e-06,LRR_8|PF13855.2|5.7e-05,LRR_8|PF13855.2|0.0012,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.38,LRR_4|PF12799.3|10,LRR_4|PF12799.3|1.4,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|77,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|3.6e+03,LRR_4|PF12799.3|0.084,LRR_4|PF12799.3|8.6,LRR_4|PF12799.3|0.025,LRR_4|PF12799.3|13,LRRNT_2|PF08263.8|1.7e-11,LRRNT_2|PF08263.8|8.7e+03,LRR_1|PF00560.29|2.5,LRR_1|PF00560.29|4.3,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|6.1e+02,LRR_1|PF00560.29|5.6e+03,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|3.8e+02,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|10,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|17 R_Transcript_333589:687-2615(-)
ATGATGAGTTCCAGCTTCAGCTTCTCAGTTCAGTGCTTCTTGTTCTTGAACGTCTCATTGTTATTCCTCAATCAAGTTTCCTCAACTGACAAAGCAGCATTGCTGGAGTTCAAATCAGGAATCGATGAAGTTTCTCCTAGGCAGCTGGCTTCTTGGAATGATTCTCGAGATTTCTGCCAATGGGTTGGTGTGATCTGCAGCCGAAGACACTACCAAAGAGTCGTTGGGCTAGACCTTGAAAGTCGAAACTTAGCAGGTTTGATCTCTCCTAGGATAGCGAATCTCTCTTTCCTGAGAATCCTGAACCTAGCAAACAACTCCTTCAGGGGTAACATCCCCTCAGAAGTTGGGCACTTGATCAGACTTCAAAACTTGAACATTAGCTACAACTCCTTGCAAGGTGAAATCCTATCTACTTTGTCCAACTGTTCTAAACTTGTGAATCTTGCATTAGAGCATAACTCACTTCATGGGCATATGCCTTCTGAACTTGGATCATTGTCTAGGCTTATTACTCTTTCTTTTCATGATAATAATCTTACTGGCGTGGTCCCTCCATCTATTGGTAATCTGTCATCTCTTCAACAGCTTTTTCTGTTTAGGAACCAATTAGAAGGAGAACCTCCTAGCACCATTTCTTTGCTCAGCAATCTAAAACAGCTAGGACTTGCGGCTAACAACTTTTACGGTACTTTGCCATCTTCAATCTATAACTTATCCTCTGTGCAAGTAATATCTCTGGCTTTTAATAGCTTTTCTGGTCATCTTAGGCCTGATATAGGCCTTGCTCTTCCAGACCTTCAGGTGCTTCTTTTGTCGACAAACAATTTGACTGGTCTCATTCATGCATCGTTGGCCAATGCTTCGAGCTTAACATACATTGATCTCAGCGCAAACAGTTTCACTGGAACTGTACCCCTGACATTTGGGTATCTGCAAGATTTATTGTTTCTGAACATTGAAGAAAATCACTTAGGGGGCAATGATGGTGAAGATTTAGAGTTTATCACCTCTTTGGACAACTGCACCTATCTAGATCTACTGTCCTTTGAGGGGAACAACTTTCAGAGCAATTTGCCTAGCTCAATAACCAACCTCACAAACCAACTGACATGGCTAAGCTTTGGAAGTAATTACATTCAGGGGCGCATCCCGGTAGGAATTTCAAAGCTTTCAAACCTGTTTGTGTTGAGTGCAGAAGCAAACCTCTTGACAGGCATCATTCCTGATAGTATCGGACAGCTTTCCAACCTGCAAGTTTTGTCATTGGCTGGCAATAATTTAACAGGACAGCTTCCCTCATCCCTGGTTAACATTTCTGGACTCTCGTCACTCCTACTGAATTACAACCACCTTGGAGGAACTTTGCCATCGTTTATCAGAAATATCATGAGTTTGCAGGTGCTCAACTTGTCTTCAAATGAATTTGATTCCATACCAAAGGAGCTGTTTTGCCAATCTGCATTATACAGTGTGAACATGTCCGATAACCACTTCAATGGCCACTTGCCACAAGAGATAGGAATGTGGACAGGACTTACCACATTAGATGTTTCATCCAACAGACTTTCGGGTAACATTCCCACCACAGTAGGGCGTTGTTTGAGCCTGGAAGAACTATACATGCAAAATAATCTCTTCAATGGAAGCATACCTTGTTTAAGGGAGTTAAAAGGCATCAAACGTATAGACCGTTCTCAAAACAACCTATCAGGCCAAATACCATCATATATAGGACACCTGTCTACACTGCAGATCTTGAACTTGTCCTTTAACAATTTAGATGGAGGGGTGCCTGTAGAGGGGATTTTCCAGAATGCAAGTGCATTTGACATAAAGGGCAACATTAGGCTTTGTGGAGGAATACAAGAATTGCATCTGGAGCCATGCCCTGCTAGAAAGCAAGAAAGAACCAGAAAGCACATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_333589.p1 GENE.R_Transcript_333589~~R_Transcript_333589.p1 ORF type:complete len:643 (-),score=85.42,LRR_8|PF13855.2|0.12,LRR_8|PF13855.2|0.0039,LRR_8|PF13855.2|3e-06,LRR_8|PF13855.2|0.00022,LRR_8|PF13855.2|5.4e-05,LRR_8|PF13855.2|9e-06,LRR_8|PF13855.2|0.0055,LRR_8|PF13855.2|0.33,LRR_8|PF13855.2|1.5e-06,LRR_8|PF13855.2|5.7e-05,LRR_8|PF13855.2|0.0012,LRR_8|PF13855.2|0.01,LRR_8|PF13855.2|0.38,LRR_4|PF12799.3|10,LRR_4|PF12799.3|1.4,LRR_4|PF12799.3|0.014,LRR_4|PF12799.3|2.6,LRR_4|PF12799.3|77,LRR_4|PF12799.3|0.27,LRR_4|PF12799.3|2.3,LRR_4|PF12799.3|3.6e+03,LRR_4|PF12799.3|0.084,LRR_4|PF12799.3|8.6,LRR_4|PF12799.3|0.025,LRR_4|PF12799.3|13,LRRNT_2|PF08263.8|1.7e-11,LRRNT_2|PF08263.8|8.7e+03,LRR_1|PF00560.29|2.5,LRR_1|PF00560.29|4.3,LRR_1|PF00560.29|8.7e+02,LRR_1|PF00560.29|1.4e+02,LRR_1|PF00560.29|6.1e+02,LRR_1|PF00560.29|5.6e+03,LRR_1|PF00560.29|2.8e+02,LRR_1|PF00560.29|3.8e+02,LRR_1|PF00560.29|1.8e+03,LRR_1|PF00560.29|1.2,LRR_1|PF00560.29|1.6e+03,LRR_1|PF00560.29|10,LRR_1|PF00560.29|1.4e+03,LRR_1|PF00560.29|22,LRR_1|PF00560.29|1.3e+02,LRR_1|PF00560.29|17 R_Transcript_333589:687-2615(-)
MMSSSFSFSVQCFLFLNVSLLFLNQVSSTDKAALLEFKSGIDEVSPRQLASWNDSRDFCQWVGVICSRRHYQRVVGLDLESRNLAGLISPRIANLSFLRILNLANNSFRGNIPSEVGHLIRLQNLNISYNSLQGEILSTLSNCSKLVNLALEHNSLHGHMPSELGSLSRLITLSFHDNNLTGVVPPSIGNLSSLQQLFLFRNQLEGEPPSTISLLSNLKQLGLAANNFYGTLPSSIYNLSSVQVISLAFNSFSGHLRPDIGLALPDLQVLLLSTNNLTGLIHASLANASSLTYIDLSANSFTGTVPLTFGYLQDLLFLNIEENHLGGNDGEDLEFITSLDNCTYLDLLSFEGNNFQSNLPSSITNLTNQLTWLSFGSNYIQGRIPVGISKLSNLFVLSAEANLLTGIIPDSIGQLSNLQVLSLAGNNLTGQLPSSLVNISGLSSLLLNYNHLGGTLPSFIRNIMSLQVLNLSSNEFDSIPKELFCQSALYSVNMSDNHFNGHLPQEIGMWTGLTTLDVSSNRLSGNIPTTVGRCLSLEELYMQNNLFNGSIPCLRELKGIKRIDRSQNNLSGQIPSYIGHLSTLQILNLSFNNLDGGVPVEGIFQNASAFDIKGNIRLCGGIQELHLEPCPARKQERTRKHI*

Click here to download the sequence:
Link to NCBI Protein BLAST