Transcript Information: R_Transcript_3337.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value1.1E-191
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3189785305275
Replicate 20.48942425212816
Replicate 30.58735224605519
Condition 2: 8 Hour
Replicate 11.25568538191
Replicate 20.83397228312114
Replicate 31.3962777400298
Condition 3: 24 Hour
Replicate 11.5519263627119
Replicate 21.4909149366591
Replicate 31.8367304632361


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3337.p1 GENE.R_Transcript_3337~~R_Transcript_3337.p1 ORF type:5prime_partial len:429 (+),score=78.21 R_Transcript_3337:3-1289(+)
CCAACAGGTAATTATCATCTCATCTTTCTTGATTTGGGCTCAAAGCTTGAGAATTCCCACAAAATATTGGATTTTGTTGATGGGTCTAAGTGGAATTTTGGGGAAAAGTTGGTCCATTATAGGACACTCAATGTGGGCTTGCAGGCCCAGTGGTTGGAAGCTTGGTGGCCTAGCAATGATGATGAGTTTGTGTTTGTTGTTGAAGATGATTTGGAGGTTTCTCCTCTTTATTATCAGTTCCTTAAGAGATTGATTGTTAATTATTATTACAATCAGTCTAATTTCAGCCCCTGGGTTTATGGTGCTTCCTTGCAACGACCAAGGTTTGTCCCAGGTAGACATGGAAACAAGATGCAGTTGGATAGTGAAACTAGAATCTTTCTCTATCAGTTGGTTGGAACTTGGGGTCAGCTTCTCTTTCCAAGACCCTGGAAGGAATTTCGCTTGTGGTATGACGATCATAAAGCCAGGGAGATGAAGCCGTTTCTTGAGGGAATGGTTACAACAGGATGGTACAAAAGGATGGGGGAGAGGATATGGACTCCATGGTTTATTAAATTTATTCATTCTCGTCGCTATTTCAATTTCTATTCAAATTTTCTCCACGAAAGGGCTCTTAGCGTTTCCCACAGAGATGCAGGTGTTAACTATGGGAAAACAGCAGGTCCAGATTCAGAACTATTGACCGAAAATTCTATTGATATCAACCGTCTGGACATGCAACCACTGAGTAGTCTGCAGTGGTATGATTTCTGCTTCAAAAAAGTCCTTCCTGGGAGAGTTGCAAAGAAGCTTGATGATGTTGGCCCTATCCTTCAGTCGATGAGTGAACAAAAGCCTGTCCTGTTGGTCAGCCTACTGATGGCTTCAGATATGATCATAAGAAATATGATTTGCCACTTTGAGAAGCTTAATATTCAAAACTACATTTTTATGTTGCCTAGGTCTAATTCAGACATGCTGCTTGATCTAGGAAGGCGAGGACATCCTGTGATTGATACAGAGGATGTCTTTGACAGCATCAAGAGAAGCCAAAGATCAAGTCCAGTAAAAATCAAAGAAATGGTGGTAAAAGCATATGTAGTTGAAAAATGTTTGGAATCTGGGTTTGACAGTTGGGTGTTTGATTGGAACACACTTCTACTTGGTGATTATCAACTACTCGACTCAACAGATTCTACGCATGACTTCTATGCTGGCAAGGGTTCTGGTTTTTTCAACACCAGATGCTCCTCTTCTCACAAGATATGGCGTGGAAGTTTGTGCCAAAAATTGCAACCATGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3337.p1 GENE.R_Transcript_3337~~R_Transcript_3337.p1 ORF type:5prime_partial len:429 (+),score=78.21 R_Transcript_3337:3-1289(+)
PTGNYHLIFLDLGSKLENSHKILDFVDGSKWNFGEKLVHYRTLNVGLQAQWLEAWWPSNDDEFVFVVEDDLEVSPLYYQFLKRLIVNYYYNQSNFSPWVYGASLQRPRFVPGRHGNKMQLDSETRIFLYQLVGTWGQLLFPRPWKEFRLWYDDHKAREMKPFLEGMVTTGWYKRMGERIWTPWFIKFIHSRRYFNFYSNFLHERALSVSHRDAGVNYGKTAGPDSELLTENSIDINRLDMQPLSSLQWYDFCFKKVLPGRVAKKLDDVGPILQSMSEQKPVLLVSLLMASDMIIRNMICHFEKLNIQNYIFMLPRSNSDMLLDLGRRGHPVIDTEDVFDSIKRSQRSSPVKIKEMVVKAYVVEKCLESGFDSWVFDWNTLLLGDYQLLDSTDSTHDFYAGKGSGFFNTRCSSSHKIWRGSLCQKLQPC*

Click here to download the sequence:
Link to NCBI Protein BLAST