Transcript Information: R_Transcript_333726.p1


Annotated TAIR IDAT5G01010.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:1388-4924 | Reverse length=479
E-Value2.6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29440259604385
Replicate 20.50797501007173
Replicate 30.55419526442304
Condition 2: 8 Hour
Replicate 10.19746665280036
Replicate 20.54098907680288
Replicate 30.29276791323205
Condition 3: 24 Hour
Replicate 10.18514360667503
Replicate 20
Replicate 30.35302749494996


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_333726.p1 GENE.R_Transcript_333726~~R_Transcript_333726.p1 ORF type:5prime_partial len:124 (-),score=0.71 R_Transcript_333726:187-558(-)
CCATATCGATGTCTCTGCTCTTCCATAGGCCCATCGTCATCATTTATCTGTTTGATAAAGTCCAGCAGAACCTACATTATACACAACCAGAGTAATACAATTATTCTGACAAAGCACCAAACAGATTTGCAAAACAACAGAGTCAATATTTATAAACCAAAGGGACAGTTCAACAGTGAGGCTGCACATAGGCTAATTATTGCACAAGTTGGTTCACTCTTTCTGAAAGCAACGTCAAACTCAATACTCAAAAAGCACATTGAGAAAATAATTATTGCCTTTTCTAGTAGCAGAGTCTGCGAACTAGTACTCCCTCCTATTCTAAATAAACTTCTCCTTTCCTTTTTTATGGTCAAACTTCTTAAATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_333726.p1 GENE.R_Transcript_333726~~R_Transcript_333726.p1 ORF type:5prime_partial len:124 (-),score=0.71 R_Transcript_333726:187-558(-)
PYRCLCSSIGPSSSFICLIKSSRTYIIHNQSNTIILTKHQTDLQNNRVNIYKPKGQFNSEAAHRLIIAQVGSLFLKATSNSILKKHIEKIIIAFSSSRVCELVLPPILNKLLLSFFMVKLLKF*

Click here to download the sequence:
Link to NCBI Protein BLAST