Transcript Information: R_Transcript_3338.p1


Annotated TAIR IDAT5G12260.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: glycosyltransferase family protein 2 (TAIR:AT5G60700.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3966417-3968684 | Forward length=624
E-Value1E-112
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6812863077321
Replicate 27.6303628342156
Replicate 38.324643662992
Condition 2: 8 Hour
Replicate 18.3610270551569
Replicate 29.3261238898603
Replicate 39.3857108573708
Condition 3: 24 Hour
Replicate 19.8550587123803
Replicate 27.3158907539476
Replicate 39.6092362040037


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_3338.p1 GENE.R_Transcript_3338~~R_Transcript_3338.p1 ORF type:complete len:410 (+),score=69.27 R_Transcript_3338:1691-2920(+)
ATGCAGTTGGATAGTGAAACTAGAATCTTTCTCTATCAGTTGGTTGGAACTTGGGGTCAGCTTCTCTTTCCAAGACCCTGGAAGGAATTTCGCTTGTGGTATGACGATCATAAAGCCAGGGAGATGAAGCCGTTTCTTGAGGGAATGGTTACAACAGGATGGTACAAAAGGATGGGGGAGAGGATATGGACTCCATGGTTTATTAAATTTATTCATTCTCGTCGCTATTTCAATTTCTATTCAAATTTTCTCCACGAAAGGGCTCTTAGCGTTTCCCACAGAGATGCAGGTGTTAACTATGGGAAAACAGCAGGTCCAGATTCAGAACTATTGACCGAAAATTCTATTGATATCAACCGTCTGGACATGCAACCACTGAGTAGTCTGCAGTGGTATGATTTCTGCTTCAAAAAAGTCCTTCCTGGGAGAGTTGCAAAGAAGCTTGATGATGTTGGCCCTATCCTTCAGTCGATGAGTGAACAAAAGCCTGTCCTGTTGGTCAGCCTACTGATGGCTTCAGATATGATCATAAGAAATATGATTTGCCACTTTGAGAAGCTTAATATTCAAAACTACATTTTTATGTTGCCTAGGTCTAATTCAGACATGCTGCTTGATCTAGGAAGGCGAGGACATCCTGTGATTGATACAGAGGATGTCTTTGACAGCATCAAGAGAAGCCAAAGATCAAGTCCAGTAAAAATCAAAGAAATGGTGGTAAAAGCATATGTAGTTGAAAAATGTTTGGAATCTGGGTTTGACAGTTGGGTGTTTGATTGGAACACACTTCTACTTGGTGATTATCAACTACTCGACTCAACAGATTCTACGCATGACTTCTATGCTGGCAAGGGTTCTGGTTTTTTCATCGCCAGAAGCTCCTCCTCTTCTCGCAAGATTTGGCGTGGAAGTTTTGTGTCAAACTTTGCCACCATGTTAGAGTCTCTGGGTCGCCAAGATTCATCTGTCGTAGAGCACGGGAACTTCGGTGATGTAGTTGTGAAGTTTTCAGACAGACTTGGCGTTGGGTTGAAGATTATTGATGAGTCAAGCTTTAGCTTGAAACTTGAGAGCGTCAGTGGCAATCAATCAATACCAGCAAATACGAAAATGATTTCTTGGTCACTTCAGACAGATATGGATTCAGTACAGAAGCATCTCCAAGAAACGGGGATGTGGATAATTGATGGTGATTCCTCTTGCAAAGCTGTGATTTGTCACCAATCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_3338.p1 GENE.R_Transcript_3338~~R_Transcript_3338.p1 ORF type:complete len:410 (+),score=69.27 R_Transcript_3338:1691-2920(+)
MQLDSETRIFLYQLVGTWGQLLFPRPWKEFRLWYDDHKAREMKPFLEGMVTTGWYKRMGERIWTPWFIKFIHSRRYFNFYSNFLHERALSVSHRDAGVNYGKTAGPDSELLTENSIDINRLDMQPLSSLQWYDFCFKKVLPGRVAKKLDDVGPILQSMSEQKPVLLVSLLMASDMIIRNMICHFEKLNIQNYIFMLPRSNSDMLLDLGRRGHPVIDTEDVFDSIKRSQRSSPVKIKEMVVKAYVVEKCLESGFDSWVFDWNTLLLGDYQLLDSTDSTHDFYAGKGSGFFIARSSSSSRKIWRGSFVSNFATMLESLGRQDSSVVEHGNFGDVVVKFSDRLGVGLKIIDESSFSLKLESVSGNQSIPANTKMISWSLQTDMDSVQKHLQETGMWIIDGDSSCKAVICHQS*

Click here to download the sequence:
Link to NCBI Protein BLAST