Transcript Information: R_Transcript_333832.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.896411527763
Replicate 20.63625152776661
Replicate 30.79330692973688
Condition 2: 8 Hour
Replicate 10.95399473820436
Replicate 21.4520053143627
Replicate 31.0215192124027
Condition 3: 24 Hour
Replicate 10.69569112811225
Replicate 20.76381848971696
Replicate 30.56851181004928


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_333832.p1 GENE.R_Transcript_333832~~R_Transcript_333832.p1 ORF type:complete len:231 (+),score=25.61,RVT_1|PF00078.23|8.1e-29 R_Transcript_333832:2335-3027(+)
ATGCAGTTAGATATTCAGAAAGAATATGACACAATCAGTTGGAACTTCATAAAGGTTGTGATCATCACCTTTGGATTTCCTACTCAATTTTGTGACAAAGTAATGGCCTGTATCACATCTTCGAGGTTCTCTATAAGCATAAATGGCTGGCAAAAAGAATACTTTGAAGGTAAAGGTGGGCTGAGGCAAGGGGATCCATTATCCCCCTACCTTTTTGTCCTTAGCATGGAAGCTCTTTCAAGAATGCTCAGACGGCTCAAAAGGGCACAGGGGTATTCCTTCCACCGAAAGTGCAGAAGAATGGAACTCAACCACCTTGCCTTTGCAGATGATTTACTAACTTTTACAAGGGGTGACCATCCATCTGTAGAAGCAGCCATACACTGTGTCACCAGATTCTCCCTCATGTCTGGCCTAAAAATAAACCCTAACAAGACTTGTATTTTCTTTGGAGGGCTAAAGCAAGAAGTAAAGGATCTGATTTTGAGGTCTATTGGGTTCATTGAAGGTAAATTACATGTGAGATATCTAGGACTTCCCCTAAGCTCCTCAGGTATCAAAGCAGATATGTGCAAAAGTCTGATAGAGAAAATGCAGCATAAATTCAATCACTGGGCAAGTCAGACACTCTCCTATGCAGGTAAGATTGAGTTGTTAACTCAGTACTATTTGGGATGGAAACTTTTGGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_333832.p1 GENE.R_Transcript_333832~~R_Transcript_333832.p1 ORF type:complete len:231 (+),score=25.61,RVT_1|PF00078.23|8.1e-29 R_Transcript_333832:2335-3027(+)
MQLDIQKEYDTISWNFIKVVIITFGFPTQFCDKVMACITSSRFSISINGWQKEYFEGKGGLRQGDPLSPYLFVLSMEALSRMLRRLKRAQGYSFHRKCRRMELNHLAFADDLLTFTRGDHPSVEAAIHCVTRFSLMSGLKINPNKTCIFFGGLKQEVKDLILRSIGFIEGKLHVRYLGLPLSSSGIKADMCKSLIEKMQHKFNHWASQTLSYAGKIELLTQYYLGWKLLV*

Click here to download the sequence:
Link to NCBI Protein BLAST