Transcript Information: R_Transcript_333865.p1


Annotated TAIR IDAT4G20520.1
Annotated Gene NameRNA binding;RNA-directed DNA polymerases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11045912-11047716 | Forward length=376
E-Value8E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.65189146266853
Replicate 20.29994714880426
Replicate 30.49085866277469
Condition 2: 8 Hour
Replicate 10.46639742756657
Replicate 20.37268136401976
Replicate 30.69148992839569
Condition 3: 24 Hour
Replicate 11.093228915605
Replicate 20.26256260584021
Replicate 30.57324940846636


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_333865.p1 GENE.R_Transcript_333865~~R_Transcript_333865.p1 ORF type:complete len:420 (+),score=54.91,RVT_1|PF00078.23|1.8e-40 R_Transcript_333865:950-2209(+)
ATGAATTTCATGCTTGATCAAGAGCCCACTCAAGAGGAAATTTATTCATCCCTCAAGCAAATGCACCCCAAAAAGGCTCCGGGACCGGATGGAATGCACAAATTATTTTTTAAGAAGTTTTGGCATATAGTGGGGCATAGCGTGGTCAATTTTGTTTCTGCTTGGTGGAGAGGCGAAGTGGAGCTTACTGAGGTAAATGCTACTAATATTGTCCTTATCCCTAAAGTTAAGGAACCAAAATACATTACAGAGTTCCGCCCTATTAGCCTTTGTAATGTGCTCTATAAGATTATTTCTAAAACTCTTGCAAATAGACTCAAAGGCATCCTTCCTTCGTTGATATCTGAGAATCAAAGCGCATTTATTCCTGGAAGATTAATAACAGATAATGCCTTAATCGCCTTTGAGGTGTTCCATGCGCTTAAGAACAAAAGGAGGGGTCGGAAAGGTTCTTTTGCACTAAAACTTGACATGAGTAAAGCTTATGACAGAGTTGAGTGGAGGTTTTTAGAGAAAATGATGCACAAGTTCGGCTTTAGTGAGCTATGGGTGTCCAGAATATTGAAATGCCTCTCTACCGTCTCTTTCTCTTTCCTTATCAATGGGAAAGCATGTGGACGGGTTTCACCCTCACGAGGCCTTCGACAAGGGGACCCCATCTCCCCCTATTTATTTATCTTATGTGCTGATGCTCTTTCTTTAATGCTTTCTAGTGCAGCAAATAATGGGATCATCCATGGAGTCAAAGTGTGCCGAGGGGCACCATCGGTTTCTCACCTGTTTTTTGCCGACGACGGTATCTTCTTTGCTAGAGAAAATGTCCAGGAATGTAAGCAGGTAACTAAGCTTATCCACATGTATGAGCAAGCATCGAGGCAAAAGGTTAACTTTGAGAAATCAGAGGTTACCTTTGGAGCTAATGTGCCAAGGGCGATCCGAGATGATATTGTTCGTGAACTGGGGGTCAAAGAAGTGAACAAACATGAAAAATATTTGGGACTACCAACTATCATTGGAAGATCAAAGAAGGCAGTTTTGGGCTGCATTAAGGATCGAGTATGGAAGAAGTTTCAAGGTTGGAAAGAAAAATTGCTCTCCAAGCCGGGGAAAGAAATCCTTATCATGGCGGTTGCACAAGCTATTCCAACATATATTATGAGTATATTTAAACTTCCGGATGGGCTTTGTGATGAGATTAATTCTTTGATGGCAAGGTTTTGGTGGGAAGGTGATGAGGAGAGAAGGAAGGTGTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_333865.p1 GENE.R_Transcript_333865~~R_Transcript_333865.p1 ORF type:complete len:420 (+),score=54.91,RVT_1|PF00078.23|1.8e-40 R_Transcript_333865:950-2209(+)
MNFMLDQEPTQEEIYSSLKQMHPKKAPGPDGMHKLFFKKFWHIVGHSVVNFVSAWWRGEVELTEVNATNIVLIPKVKEPKYITEFRPISLCNVLYKIISKTLANRLKGILPSLISENQSAFIPGRLITDNALIAFEVFHALKNKRRGRKGSFALKLDMSKAYDRVEWRFLEKMMHKFGFSELWVSRILKCLSTVSFSFLINGKACGRVSPSRGLRQGDPISPYLFILCADALSLMLSSAANNGIIHGVKVCRGAPSVSHLFFADDGIFFARENVQECKQVTKLIHMYEQASRQKVNFEKSEVTFGANVPRAIRDDIVRELGVKEVNKHEKYLGLPTIIGRSKKAVLGCIKDRVWKKFQGWKEKLLSKPGKEILIMAVAQAIPTYIMSIFKLPDGLCDEINSLMARFWWEGDEERRKVYW*

Click here to download the sequence:
Link to NCBI Protein BLAST