Transcript Information: R_Transcript_334096.p1


Annotated TAIR IDAT1G08470.1
Annotated Gene Namestrictosidine synthase-like 3
Annotated Gene Symbol(s)SSL3
Annotation TypeOrtholog
Chromosome Positionchr1:2682262-2683977 | Reverse length=390
E-Value4.6E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3117897256306
Replicate 28.5797065152893
Replicate 37.7324774118992
Condition 2: 8 Hour
Replicate 110.067792186431
Replicate 27.7184769807138
Replicate 38.7072446884597
Condition 3: 24 Hour
Replicate 112.760811631643
Replicate 212.930875136354
Replicate 310.110564093948


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_334096.p1 GENE.R_Transcript_334096~~R_Transcript_334096.p1 ORF type:complete len:394 (+),score=51.86,Str_synth|PF03088.12|7.8e-31,SGL|PF08450.8|5e-15,SGL|PF08450.8|92,SGL|PF08450.8|1e+03,NHL|PF01436.17|6.2e+03,NHL|PF01436.17|3,NHL|PF01436.17|58,NHL|PF01436.17|21,NHL|PF01436.17|1.5e+02 R_Transcript_334096:219-1400(+)
ATGGCAGGCCCGGGTCAGGTGCTGGGGTTTGTCCTGTTGGCAGTTGCACTTTATTGTGGGCTTGACCCGTTTAACCAAAGCGCTATTTCCGGGTTTCCGGACTTTGTCTCTCACAAAATTGACTTGCCTGATGCTTCCCTTATCCCAACGAACAAAGACCCGCAGAATTTGTTGCAAAGATCCGAAATTAAGTTCTTGGGTCAAATTCAGGGACCCGAAAGTCTTGTTTTCGACCCTCTGGGTCGGGGTCCCTACACTGGTGTTGCCGATGGTCGGGTTCTTTTCTGGAATGGTCACACTTGGACTGATTTTGCTTTTACTTCTTCTAACCGGTCTGTATGTAATCCACAGCCCTCTCCTTTCGGCTACTTAAAGAATGAGCACATATGTGGTAGGCCATTAGGGCTAAGATTTCACAAGAAAACTGGTGACTTATACATCGCAGATGCATATTTTGGTTTGATGAAAGTGGGTCCAGAAGGTGGCCTGGCAACATCACTTTCAACTGAAGCAGAAGGTACACCTTTTAGATTTACAAATGATTTGGATATTGATGACGACGGAAATGTATATTTTACAGACAGCAGCACTCAATATCAGAGAAGGAACTTCATGCAGTTGGTATTTTCAGCAGAGGATACTGGTAGGGTCCTGAAGTATGATCCAGTAACAAAAGAGACTACAGTCCTTCTGAGGAATATCCAATTCCCTAATGGTATTACATTGAGCAAAGATGGCTCCTTCTTTATCTTTTGTGAAGGCTCCGTCGGCAGGCTGCACAGATTCTGGTTGAAAGGTACAAAAGCTGGAACCTCAGAAATATTTGCAATTCTACCAGGATTCCCAGATAATGTTAGAACAAACCAAAACGGTGAATTTTGGGTAGCATTACACTGCCGGCGAAGCAGAAGCAATTATCTTGTGGCAAAGTACACAAAGTTACGTGATTTCTTACTGAAGCTCCCAATAAGCGCAAAGTTCCAGTTCATGATTTACATTGGGGGCTGGCCCCATGGAATCATAGCAAAGTACAGCCCCGAAGGTGAGCTCCTGCAGATCCTAGAGGATCGTCCTGGAAAGATGGTGAAAGCTGTGAGTGAAGTGGAGGAGAAAGATGGCAAGCTCTGGATTGGCAGCGTCTTAATGAATTTTGTTGCTGTTTACGACTTGAGTTCAAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_334096.p1 GENE.R_Transcript_334096~~R_Transcript_334096.p1 ORF type:complete len:394 (+),score=51.86,Str_synth|PF03088.12|7.8e-31,SGL|PF08450.8|5e-15,SGL|PF08450.8|92,SGL|PF08450.8|1e+03,NHL|PF01436.17|6.2e+03,NHL|PF01436.17|3,NHL|PF01436.17|58,NHL|PF01436.17|21,NHL|PF01436.17|1.5e+02 R_Transcript_334096:219-1400(+)
MAGPGQVLGFVLLAVALYCGLDPFNQSAISGFPDFVSHKIDLPDASLIPTNKDPQNLLQRSEIKFLGQIQGPESLVFDPLGRGPYTGVADGRVLFWNGHTWTDFAFTSSNRSVCNPQPSPFGYLKNEHICGRPLGLRFHKKTGDLYIADAYFGLMKVGPEGGLATSLSTEAEGTPFRFTNDLDIDDDGNVYFTDSSTQYQRRNFMQLVFSAEDTGRVLKYDPVTKETTVLLRNIQFPNGITLSKDGSFFIFCEGSVGRLHRFWLKGTKAGTSEIFAILPGFPDNVRTNQNGEFWVALHCRRSRSNYLVAKYTKLRDFLLKLPISAKFQFMIYIGGWPHGIIAKYSPEGELLQILEDRPGKMVKAVSEVEEKDGKLWIGSVLMNFVAVYDLSSS*

Click here to download the sequence:
Link to NCBI Protein BLAST