Transcript Information: R_Transcript_334210.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value8E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.64548781372286
Replicate 20.16500039619881
Replicate 30.45003413744897
Condition 2: 8 Hour
Replicate 10.43295242539333
Replicate 20.13179301674569
Replicate 30.42793581030382
Condition 3: 24 Hour
Replicate 10.18041498803697
Replicate 20.043330567564985
Replicate 30.43001384453629


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_334210.p1 GENE.R_Transcript_334210~~R_Transcript_334210.p1 ORF type:5prime_partial len:509 (+),score=50.26,RVT_3|PF13456.2|4.3e+03,RVT_3|PF13456.2|5.9e-18,zf-RVT|PF13966.2|2.3e-18,zf-RVT|PF13966.2|5.3e+03 R_Transcript_334210:1-1527(+)
GTTAAAACAATGCTTTCAAGACAAGCGAATGTGGCGTTTTTAATGAAACTAGGGTGGAGAACCCTCTGGTCAAGAGTAGTGAGGAGTAAATATTGCGGCAACCGCTGCGACGTCGACATGTTTCAAGCACGTCAGCATCAGTCCAATGCCTGGAAAGGCATGGTGGCGGCTTCCCCTTGCCTACGGTCAGGAATAAAGTCAGTGGTGGGGGATGGTACTAGGACTTTCTTTTGGCTTCATAACTGGGCAACCAATAAACCTTTGGAACAATTAGCTTTGCAGACTCTTGATGACAACACTCTATGTCGTACGGTAGCAGAGTATTGGGATGGAGAAAGGTGGAAATGGGACCTTTTTGCACACCTACTCCCTGCTGACACACTCCAAATGATCGCTGCCCACTCATTGCAACATGAATACCCGGCCGTGGATAGACTTTCCTGGGGCCATACATCCACGGGGGAGTTCTCAGCTAAGTCCGCCATGGAAATAGTGAGAGGCTCAACACATGAGGAGCCACATACCAACTGGAAGAGGGTTTGGAGGGTAGCAGCCTCACAAAGGGTTAGAACTTTTCTTTGGTTAGCATTACATGACAGCTTTCTAAGCAATGCGAATAGAGTTCGAAGGCACCTTGCCAGTGATGCTTCATGTACTGCTTGTGGCGAGAGAGACGAGACAGGCCTCCACATCTTGCGGGACTGCCCCTTGGCCAAAGAAGTTTGGGACCCTATCATCCCTTATCATCAAGCAGTAAACTTCTATGATCGCTCTCTAACTGATTGGATAATGGAGAATATTGCTGAGTTGAATGAATGGGCAACTATCTTTTCAACCACACTTTGGTGGCTATGGCGATGGAGGAATGCCAGGGTACTAGGAGATGCGCGTTCTATACCTCCACAGAGACACATTTTTGTAACTCAACAAGGTCAGGAATACCTCGAGGCCGAATCTAGGAGGAAGTCTCATCTCAACGACACCATAATTGAAAAGCAAGAGGTTAGTATTGCATGGCAGACACCACCAGATGGGTGGGTGAAACTCAACACTGATGGGGCGGCGAAAAGAAATCCTGGATTTGCAGGATGCGGGGGTATTCTACGCTCTCCCCTAGGAGCGTTCATTCGGGCCTTTGCACTCAAGTTGGGTAGGACCACGGCCCTGCATGCAGAACTCCAGGCGATATACCAAGGACTACGAATGGCCAGAAGATTGCAAATACCTCAACTGATTGTGGAAGTTGACTCTGAAGTGGCTCTGTGTATGCTCCGGGCCGATGTACCTGATCACTGCCCCTACTACTATCTTCTATGGAATTGCAAGGATCTAATAAACCAAGATAATTGGACTGTCAAACTCCACCATATTTATCGTGAAGCAAATTGTGCAGCGGATTGGTTCGCAAATTGGAGCTTCGCCCTAGCACAGAATCTGGAAGAATTTGCCTCCCCCCCTCCTGGTGCTGTTAGTGTCTTGTTTAAGGGCTTGCTAGGGAGAGGCCAAACTCGTTTAGTTTCCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_334210.p1 GENE.R_Transcript_334210~~R_Transcript_334210.p1 ORF type:5prime_partial len:509 (+),score=50.26,RVT_3|PF13456.2|4.3e+03,RVT_3|PF13456.2|5.9e-18,zf-RVT|PF13966.2|2.3e-18,zf-RVT|PF13966.2|5.3e+03 R_Transcript_334210:1-1527(+)
VKTMLSRQANVAFLMKLGWRTLWSRVVRSKYCGNRCDVDMFQARQHQSNAWKGMVAASPCLRSGIKSVVGDGTRTFFWLHNWATNKPLEQLALQTLDDNTLCRTVAEYWDGERWKWDLFAHLLPADTLQMIAAHSLQHEYPAVDRLSWGHTSTGEFSAKSAMEIVRGSTHEEPHTNWKRVWRVAASQRVRTFLWLALHDSFLSNANRVRRHLASDASCTACGERDETGLHILRDCPLAKEVWDPIIPYHQAVNFYDRSLTDWIMENIAELNEWATIFSTTLWWLWRWRNARVLGDARSIPPQRHIFVTQQGQEYLEAESRRKSHLNDTIIEKQEVSIAWQTPPDGWVKLNTDGAAKRNPGFAGCGGILRSPLGAFIRAFALKLGRTTALHAELQAIYQGLRMARRLQIPQLIVEVDSEVALCMLRADVPDHCPYYYLLWNCKDLINQDNWTVKLHHIYREANCAADWFANWSFALAQNLEEFASPPPGAVSVLFKGLLGRGQTRLVSM*

Click here to download the sequence:
Link to NCBI Protein BLAST