Transcript Information: R_Transcript_334244.p1


Annotated TAIR IDAT2G27900.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein sorting-associated protein 54 (InterPro:IPR019515); Has 316 Blast hits to 252 proteins in 92 species: Archae - 0; Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:11877654-11885238 | Forward length=1124
E-Value1E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.603337590324
Replicate 218.174217027011
Replicate 319.827875016024
Condition 2: 8 Hour
Replicate 115.928976659229
Replicate 214.546595176255
Replicate 313.760091921906
Condition 3: 24 Hour
Replicate 116.045779245169
Replicate 213.754892641435
Replicate 317.062995589248


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_334244.p1 GENE.R_Transcript_334244~~R_Transcript_334244.p1 ORF type:5prime_partial len:186 (-),score=35.60,DUF2451|PF10474.5|5.7e-49 R_Transcript_334244:194-751(-)
GTTATTATTGCTTCGATTCAGGTTGATTCAGTGCCAGACCTTATAGAGCACATTCATAAAACAACTGCAAAATCACTTCTCCATATCAATGGGTATATTGATCGTATCGCTAGTTCTAAGTGGGAAGTCAAAGAGCTTGGAATGGAGCACAATGGTTATGTTGATCTGCTTTTGGGAGAATTCAAACATTACAGAACAAGACTTGCTCATGCAGGAATTCATAAGGAGATTCAAGACCTCCTATTGGAGCATGGTGTTGAAATTGTTGCAGAAACGCTTGTTGAAGGCCTATCACGTGTGAAGAGATGTACAGATGAAGGCCGGGCCCTTATGTCATTGGATCTACAGGTGTTGATTAATGGTCTTCAGCACTTTGTCTCTAAGGATGTAAAACCCAAACTACAAATAGTAGAGGCATTCATCAAGGCCTACTACCTTCCAGAAACTGAGTATGTGCATTGGGCACGGCAACACCCGCAAAAACCAAGTGGTAGGGCTAGTCAACCTTGTAGCAACCATGAAAGGTTGGAAAAGGAAAACAAGACTAGAAATTCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_334244.p1 GENE.R_Transcript_334244~~R_Transcript_334244.p1 ORF type:5prime_partial len:186 (-),score=35.60,DUF2451|PF10474.5|5.7e-49 R_Transcript_334244:194-751(-)
VIIASIQVDSVPDLIEHIHKTTAKSLLHINGYIDRIASSKWEVKELGMEHNGYVDLLLGEFKHYRTRLAHAGIHKEIQDLLLEHGVEIVAETLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHFVSKDVKPKLQIVEAFIKAYYLPETEYVHWARQHPQKPSGRASQPCSNHERLEKENKTRNS*

Click here to download the sequence:
Link to NCBI Protein BLAST