Transcript Information: R_Transcript_33523.p1


Annotated TAIR IDAT5G42790.1
Annotated Gene Nameproteasome alpha subunit F1
Annotated Gene Symbol(s)PAF1, ATPSM30, ARS5
Annotation TypeOrtholog
Chromosome Positionchr5:17159270-17160975 | Reverse length=278
E-Value6.8E-157
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1178.04873826588
Replicate 2161.98228877122
Replicate 3175.97667005275
Condition 2: 8 Hour
Replicate 1141.16940910018
Replicate 2163.22636492014
Replicate 3182.3679868467
Condition 3: 24 Hour
Replicate 1187.97222668748
Replicate 2179.78618980117
Replicate 3177.63018099691


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33523.p1 GENE.R_Transcript_33523~~R_Transcript_33523.p1 ORF type:complete len:277 (+),score=65.07,Proteasome|PF00227.22|2.8e-58,Proteasome_A_N|PF10584.5|3.8e-14 R_Transcript_33523:205-1035(+)
ATGTTCAGGAACCAGTATGACACAGACGTCACGACTTGGAGCCCAGCAGGGCGGCTATTTCAAGTAGAGTACGCCATGGAAGCTGTAAAACAAGGTTCAGCAGCAATTGGGCTCCGATCTAAAACCCATGTTGTATTGTGCTGCGTTAACAAGGCTCAATCTGAACTTTCCTCTCATCAACGCAAGATCTTCAAAGTTGATGACCATATTGGGGTTGCTATTGCTGGTCTCACTGCTGATGGTCGTGTTCTTTCTCGTTATATGCGATCAGAATGTATCAATTATAGCTTCACTTATGAATCCTCTCTCCCTGTTGGTCGCCTTGTTGTTCAACTTGCTGATAAGGCTCAGGTCTGCACACAGCGTTCATGGAAGCGGCCTTATGGTGTTGGCTTATTGGTAGGTGGTTTGGATGAATCTGGTGCTCATCTCTACTACAATTGTCCAAGTGGAAACTACTTTGAGTATCAGGCTTTCGCTATTGGTTCCCGTTCACAAGCCGCAAAGACGTACTTGGAACGCAAATTCGGGACTTTTGACAGTGCTTCACGAGATGAGCTGATCAAGCATGCACTCTTTGCGATAAAAGAAACCTTGCAAGGAGAGAAGCTTAAGAGCTCGATATGCACAGTTGCTGTGTTAGGGGTAGGGGAGCCATTCCAAATATTGGACCAGCAAACAGTACAGGAGTTGATCAACTCTTTCGAGATTGTTGAGGAAGAGGGGGCTGCCCCTGAAGAAGCAGCCGCTGCTCCAGAGCCAGAGGCTGCACCAGCTGCCGACCAGGGTGCTCCTGCTCCTCATGAGGGTGCTGCTCCAATGGAAGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33523.p1 GENE.R_Transcript_33523~~R_Transcript_33523.p1 ORF type:complete len:277 (+),score=65.07,Proteasome|PF00227.22|2.8e-58,Proteasome_A_N|PF10584.5|3.8e-14 R_Transcript_33523:205-1035(+)
MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLCCVNKAQSELSSHQRKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSFTYESSLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVGGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFGTFDSASRDELIKHALFAIKETLQGEKLKSSICTVAVLGVGEPFQILDQQTVQELINSFEIVEEEGAAPEEAAAAPEPEAAPAADQGAPAPHEGAAPMEE*

Click here to download the sequence:
Link to NCBI Protein BLAST