Transcript Information: R_Transcript_335406.p1


Annotated TAIR IDAT5G49530.1
Annotated Gene NameSIN-like family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:20100934-20104242 | Forward length=689
E-Value1E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.53060933007903
Replicate 20
Replicate 30.39953612086312
Condition 2: 8 Hour
Replicate 10.28471935985169
Replicate 20.26001025396727
Replicate 30.63319571931582
Condition 3: 24 Hour
Replicate 10.80085374050131
Replicate 20.89759774554675
Replicate 30.89077867911791


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_335406.p1 GENE.R_Transcript_335406~~R_Transcript_335406.p1 ORF type:5prime_partial len:172 (-),score=30.47,Sin_N|PF04801.9|6.2e-21 R_Transcript_335406:143-658(-)
CCGAAACCCAAATTCCAACCAGGAGCTAAACAGGTTCCAGCAAAACCTAAACCGGAGCCCGAACGGAAACCTGAACCAGCGGTTCAGCATGGCGACGCTCCTCCTTTACAACCGCCGGTGGTGGTCAAGATGGAAGACGGCGAGGCCGGTTCTATGTCGACCGAACGGGAGCCAATGGTGGAAGATATGAAAGATTCGGTTTCGCCGTTATTATTGGAGGACTTAATGGAGGAAGAGAAAGTGGTGGATGAGGTCGTTGAAGAGGAAGATGTTATTGTTGCTCAGTATGATGTTTTCCTTAACCCTAGCGATGATGATACTCAGTTGTATGTGTTGCAATATCCGCTTAGGCCGTCGTGGCGACCGTATGAGTTGGACCAAAGATGTACGGAGGTGAGAGTGAGACCGAGTACCGCGGAGATGGAGGTGGATATGTCAATAGATATGGATTCTGATAACTTTGATCCTCATTCGCCTTCTGCTGACAAAATGAAGAAGCAGGTTCGAATTATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_335406.p1 GENE.R_Transcript_335406~~R_Transcript_335406.p1 ORF type:5prime_partial len:172 (-),score=30.47,Sin_N|PF04801.9|6.2e-21 R_Transcript_335406:143-658(-)
PKPKFQPGAKQVPAKPKPEPERKPEPAVQHGDAPPLQPPVVVKMEDGEAGSMSTEREPMVEDMKDSVSPLLLEDLMEEEKVVDEVVEEEDVIVAQYDVFLNPSDDDTQLYVLQYPLRPSWRPYELDQRCTEVRVRPSTAEMEVDMSIDMDSDNFDPHSPSADKMKKQVRIM*

Click here to download the sequence:
Link to NCBI Protein BLAST