Transcript Information: R_Transcript_335449.p1


Annotated TAIR IDAT3G53360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19784502-19786808 | Forward length=768
E-Value3E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9291747350516
Replicate 20.34140325880159
Replicate 30.74493455597244
Condition 2: 8 Hour
Replicate 10.59721621822549
Replicate 20.90897893663356
Replicate 31.6233147709289
Condition 3: 24 Hour
Replicate 10.55994651774888
Replicate 20.53793314367262
Replicate 31.9574370045193


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_335449.p1 GENE.R_Transcript_335449~~R_Transcript_335449.p1 ORF type:internal len:123 (-),score=13.85,PPR_2|PF13041.2|85,PPR_2|PF13041.2|3.1e-10,PPR_2|PF13041.2|3,PPR|PF01535.16|0.053,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|13,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|46,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|25 R_Transcript_335449:3-368(-)
GTTGGATGCTCTCTTACTGACATGTATGCAAAGTGTGGTTTTCTAGATTCTGCTAAAGATATGTTTAACAAAATAATATGTCCTGATATAGTTTCCTGGAATGCAATTATTACTGGGCTTGCTTATGGTGGAAATGACAGTGAAGCATTGACATTTTTCCATAGGATGAGGTCTGTAGGGCTGTCTCCAGATGAAATAACAGTTCGATCTTTACTCTGTGCCTGCACTAGTCCGTCAGTAATTATTACAGGGGAGCAGTTTCACTCCTATATTATCAAGACGGGCTTGAATGTTAATATTTCTGTGTGCAATACTCTGCTGACAATGTATATGAAGTGTTCTTCTCTGGAGACAGCCCTACAGACC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_335449.p1 GENE.R_Transcript_335449~~R_Transcript_335449.p1 ORF type:internal len:123 (-),score=13.85,PPR_2|PF13041.2|85,PPR_2|PF13041.2|3.1e-10,PPR_2|PF13041.2|3,PPR|PF01535.16|0.053,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|13,PPR_1|PF12854.3|12,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|1.1e+02,PPR_1|PF12854.3|46,PPR_3|PF13812.2|3.8e+02,PPR_3|PF13812.2|0.0043,PPR_3|PF13812.2|25 R_Transcript_335449:3-368(-)
VGCSLTDMYAKCGFLDSAKDMFNKIICPDIVSWNAIITGLAYGGNDSEALTFFHRMRSVGLSPDEITVRSLLCACTSPSVIITGEQFHSYIIKTGLNVNISVCNTLLTMYMKCSSLETALQT

Click here to download the sequence:
Link to NCBI Protein BLAST