Transcript Information: R_Transcript_335594.p1


Annotated TAIR IDATCG00280.1
Annotated Gene Namephotosystem II reaction center protein C
Annotated Gene Symbol(s)PSBC
Annotation TypeOrtholog
Chromosome PositionchrC:33720-35141 | Forward length=473
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5115640418049
Replicate 24.3853032515053
Replicate 34.2527276549819
Condition 2: 8 Hour
Replicate 110.486562414116
Replicate 24.0098627774278
Replicate 33.063562973905
Condition 3: 24 Hour
Replicate 13.5841302422998
Replicate 24.0015870560963
Replicate 35.0794251383095


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_335594.p1 GENE.R_Transcript_335594~~R_Transcript_335594.p1 ORF type:complete len:474 (+),score=15.80,PSII|PF00421.15|6.4e-151 R_Transcript_335594:2743-4164(+)
ATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAATGGAACTTTAGCTTTAGCCGGTCGTGACCAAGAAACCACCGGTTTCGCTTGGTGGGCCGGGAATGCTCGACTTATCAATTTATCTGGTAAATTACTTGGAGCTCATGTAGCCCATGCCGGATTAATCGTATTCTGGGCCGGAGCAATGAACCTATTTGAAGTGGCTCATTTCGTACCAGAAAAGCCGATGTACGAACAAGGATTAATTTTACTTCCCCACCTAGCAACTCTAGGTTGGGGGGTAGGCCCCGGTGGCGAAGTTATAGACACCTTTCCATACTTTGTATCTGGAGTACTTCACTTAATTTCTTCGGCAGTATTGGGCTTTGGTGGTATTTATCATGCACTTCTGGGCCCTGAGACTCTTGAAGAATCTTTTCCATTCTTCGGTTATGTGTGGAAAGATAGAAATAAAATGACCACAATTTTGGGTATTCACTTAATCTTGTTAGGTATAGGAGCTTTTCTTCTAGTATTCAAGGCTCTTTATTTTGGAGGCGTATATGATACCTGGGCTCCAGGAGGGGGCGATGTCAGAAAAATTACCAACGTCACCCTTAGCCCAAGTATTATATTTGGTTATTTACTAAAATCTCCTTTTGGAGGAGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAATCGGGGGACATGTATGGATAGGTTCTATTTGTATACTAGGTGGAATCTGGCATATATTAACTAAACCTTTTGCATGGGCTCGTCGCGCACTTGTCTGGTCCGGCGAGGCTTATTTGTCTTATAGTTTAGGTGCTTTATCTGTCTTTGGTTTCATTGCTTGTTGCTTTGTCTGGTTCAATAATACTGCTTATCCTAGTGAGTTTTATGGACCCACTGGACCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTTTAGTTAGAGACCAACGTCTTGGGGCTAACGTGGGATCCGCTCAAGGACCTACTGGTTTAGGTAAGTATCTAATGCGTTCTCCGACTGGAGAAGTTATTTTTGGAGGAGAAACTATGCGTTTTTGGGATTTGCGTGCTCCCTGGTTAGAACCCCTAAGGGGTCCAAATGGTTTGGACTTGAGTCGGCTGAAAAAAGACATACAACCTTGGCAAGAACGACGTTCAGCGGAATATATGACTCATGCTCCTTTAGGTTCTTTAAATTCTGTGGGTGGCGTAGCTACCGAAATCAATGCAGTCAATTATGTCTCTCCTAGAAGTTGGTTAGCTACTTCTCATTTTGTTCTAGGATTTTTCCTATTCGTAGGTCATTTGTGGCATGCGGGAAGGGCTCGTGCAGCTGCAGCAGGATTTGAAAAAGGAATTGATCGTGATTTTGAACCTGTTCTTTCGATGACTCCTCTTAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_335594.p1 GENE.R_Transcript_335594~~R_Transcript_335594.p1 ORF type:complete len:474 (+),score=15.80,PSII|PF00421.15|6.4e-151 R_Transcript_335594:2743-4164(+)
MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKALYFGGVYDTWAPGGGDVRKITNVTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWIGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN*

Click here to download the sequence:
Link to NCBI Protein BLAST