Transcript Information: R_Transcript_335594.p2


Annotated TAIR IDATCG00270.1
Annotated Gene Namephotosystem II reaction center protein D
Annotated Gene Symbol(s)PSBD
Annotation TypeOrtholog
Chromosome PositionchrC:32711-33772 | Forward length=353
E-Value8.3E-273
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.0843203182396
Replicate 22.609709656263
Replicate 33.0412900198281
Condition 2: 8 Hour
Replicate 17.4010947721899
Replicate 22.779318646927
Replicate 31.8459265037682
Condition 3: 24 Hour
Replicate 12.5292499488149
Replicate 21.6198777716243
Replicate 33.8334398039199


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_335594.p2 GENE.R_Transcript_335594~~R_Transcript_335594.p2 ORF type:complete len:354 (+),score=11.44,Photo_RC|PF00124.15|1.1e-75 R_Transcript_335594:1734-2795(+)
ATGACTATAGCCATTGGTAAATTTACCAAAGACGAAAAAGATTTATTTGATATTATGGATGACTGGTTACGTAGGGACCGTTTCGTTTTTGTAGGTTGGTCTGGTCTATTGCTCTTTCCTTGTGCTTATTTCGCTGTAGGGGGTTGGTTTACAGGTACAACCTTTGTAACTTCATGGTATACCCATGGATTGGCCAGTTCCTATTTGGAAGGCTGCAATTTCTTAACCGCAGCAGTTTCTACTCCCGCTAATAGTTTAGCACATTCTTTGTTGTTACTATGGGGTCCTGAAGCACAAGGGGATTTTACTCGTTGGTGTCAATTAGGAGGCCTGTGGACCTTTGTTGCTCTTCATGGCGCTTTCGGACTAATAGGTTTTATGTTACGTCAATTCGAACTTGCTAGATCCGTTCAATTGCGCCCTTATAATGCAATCGCATTCTCCGGTCCAATTGCGGTTTTTGTTTCTGTATTCTTAATTTATCCACTAGGTCAGTCTGGTTGGTTCTTTGCACCCAGTTTTGGTGTAGCAGCTATATTTCGATTCATCCTCTTTTTTCAAGGGTTTCATAATTGGACGTTGAACCCATTTCATATGATGGGAGTTGCCGGTGTCTTGGGCGCCGCTCTGCTATGCGCTATTCATGGTGCTACTGTAGAAAATACTTTATTTGAAGATGGTGATGGGGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAAGAAACTTATTCGATGGTCACCGCTAACCGCTTTTGGTCCCAAATCTTTGGGGTTGCTTTTTCCAATAAACGTTGGTTACATTTCTTTATGTTATTTGTACCAGTAACCGGTTTATGGATGAGTGCTCTTGGGGTAGTCGGTCTGGCTTTGAACCTACGTGCCTATGACTTCGTTTCCCAGGAAATTCGTGCAGCTGAAGATCCTGAATTTGAGACTTTCTACACCAAAAATATTCTCTTAAACGAAGGTATTCGTGCTTGGATGGCAGCTCAAGATCAGCCTCATGAAAACCTTATATTCCCTGAGGAGGTTCTACCCCGTGGAAACGCTCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_335594.p2 GENE.R_Transcript_335594~~R_Transcript_335594.p2 ORF type:complete len:354 (+),score=11.44,Photo_RC|PF00124.15|1.1e-75 R_Transcript_335594:1734-2795(+)
MTIAIGKFTKDEKDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL*

Click here to download the sequence:
Link to NCBI Protein BLAST