Transcript Information: R_Transcript_33565.p1


Annotated TAIR IDAT1G20080.1
Annotated Gene NameCalcium-dependent lipid-binding (CaLB domain) family protein
Annotated Gene Symbol(s)SYTB, ATSYTB, NTMC2TYPE1.2, NTMC2T1.2, SYT2
Annotation TypeOrtholog
Chromosome Positionchr1:6962236-6964912 | Forward length=537
E-Value5.2E-291
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 180.055658064852
Replicate 254.613753587477
Replicate 363.705379696906
Condition 2: 8 Hour
Replicate 163.645077534491
Replicate 276.541422999977
Replicate 384.696290742622
Condition 3: 24 Hour
Replicate 173.132755120534
Replicate 263.26053848763
Replicate 374.840518994345


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33565.p1 GENE.R_Transcript_33565~~R_Transcript_33565.p1 ORF type:complete len:539 (+),score=110.47,C2|PF00168.26|3.3e-23,C2|PF00168.26|1.3e-16,SMP_LBD|PF17047.1|3.3e-15,NT-C2|PF10358.5|11,NT-C2|PF10358.5|0.0006 R_Transcript_33565:508-2124(+)
ATGGGGTTTGTCAGTACAATCCTCAGTTTCTGTGGATTTGGATTTGGAAGTTGCATTGGACTTGCTATGGGCTACTATTTCTTCATATTCTTCCAGTCTTTTGATGTCAAGGATCCTGAAATCCGTCCATTGGCTGAGCTAGATGCGGAAACCATACAAAAGTTGCTTCCCGAAATACCCCTTTGGGTGAAAAATCCGGATTTTGACCGTGTTGACTGGCTTAACAAGTTCATACAACTTATGTGGCCTTATTTGAATAAGGCAATTTGCAAGACTGTGAGGGATGTAACAAAGCCCATCATTGCTGAGCAAACTCCGAAGTTCAAAATTCAGTCAGTTGAATTTCATACTCTTAGTTTGGGCACCCTGCCTCCAACTTTTCAAGGAATGAAGGCCTTTATGACTGATGAAAAAGAGTTGATTATGGAACCAGCAATGAAGTGGGCGGGGAACCCAAACATTGTCGTTAAAGTCAAAGCCTTTGGATTGACTGTTTCTGTTCAGGTCGTTGATTTGCAAGTATTTGCTCATCCCCGTATTACATTGAAGCCTCTGGTGCCAGCTTTTCCTTGTTTTGCCAATATATATGTTTCTCTTATGGAGAGGCCACATGTCGACTTTGGACTAAAATTACTCGGCGCAGATGCTATGGCTATTCCCGGCTTGTATAGATTTGTTCAGGAAACTATAAAAGATCAAGTAGGAAATATGTATCTATGGCCAAAAACCCTTGTAGTACCTATATTGGATCCTAAAATGGCTAGCAAGAGGCCCATAGGAGTTTTACATGTCAAGGTTGTGAATGCAATGAATCTAAAAAAGAAGGATTTTCTTGGCGCATCTGACCCTTATGTTAAGATGAAACTTACAGAAGACAGGGCTCCTTCAAAGAAAACTACTGTAAAGCACAGAAACTTAAATCCCGAGTGGAATGAAGAATTCACACTGTCTGTAAGAAATCCAGAGTCTCAAGTTCTAGAGCTCTTCGTCTATGATTGGGAAAAGCTTGGCAAACATGAGAAGATGGGCGTGAATGCAGTTCCACTGAAAGATCTTACACCAGATGAAACAAAAGTTTTAACTCTGGATCTCCTGAAAAGCATGGATCCTGATGATGCTCGAAATGATAAGTCACGTGGGCAGCTTGTTTTGGAAGTGACATACAAACCATTCAAAGATGATGAAATGCCTGCCAATGATGAAGATTCTGGAACAGTTGAGAAGGCTCCTGAAGGGACACCTGCTGAAGGTGGTTTGCTTGTAGTCAATGTTTATCAAGCTCAAGATGTTGAAGGAAAGCACCACACTAATCCTTATGTACGTCTACTATTGAAAGGCGAAGAGAAGAAAACTAAGACTATAAAAAAAAACAGAGACCCTAGATGGAACGAGGAATTTGAGTTCATACTGGAGGAACCACCAACTGATGATAAACTCCGGGTGGAAGTGCTAAGTGTCTCATCCAGGATAGGCTTGCTTCATCCAAAGGAAATGCTGGGATATGTCGACATTAATCTTGCAGATGTGGTTAACAATAGAAGAATCAATCAGAATTACAATCTTATTGAATCCAAAAATGGCCGGATTCAGATCGAGTTGCAGTGGAGGACATCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33565.p1 GENE.R_Transcript_33565~~R_Transcript_33565.p1 ORF type:complete len:539 (+),score=110.47,C2|PF00168.26|3.3e-23,C2|PF00168.26|1.3e-16,SMP_LBD|PF17047.1|3.3e-15,NT-C2|PF10358.5|11,NT-C2|PF10358.5|0.0006 R_Transcript_33565:508-2124(+)
MGFVSTILSFCGFGFGSCIGLAMGYYFFIFFQSFDVKDPEIRPLAELDAETIQKLLPEIPLWVKNPDFDRVDWLNKFIQLMWPYLNKAICKTVRDVTKPIIAEQTPKFKIQSVEFHTLSLGTLPPTFQGMKAFMTDEKELIMEPAMKWAGNPNIVVKVKAFGLTVSVQVVDLQVFAHPRITLKPLVPAFPCFANIYVSLMERPHVDFGLKLLGADAMAIPGLYRFVQETIKDQVGNMYLWPKTLVVPILDPKMASKRPIGVLHVKVVNAMNLKKKDFLGASDPYVKMKLTEDRAPSKKTTVKHRNLNPEWNEEFTLSVRNPESQVLELFVYDWEKLGKHEKMGVNAVPLKDLTPDETKVLTLDLLKSMDPDDARNDKSRGQLVLEVTYKPFKDDEMPANDEDSGTVEKAPEGTPAEGGLLVVNVYQAQDVEGKHHTNPYVRLLLKGEEKKTKTIKKNRDPRWNEEFEFILEEPPTDDKLRVEVLSVSSRIGLLHPKEMLGYVDINLADVVNNRRINQNYNLIESKNGRIQIELQWRTS*

Click here to download the sequence:
Link to NCBI Protein BLAST