Transcript Information: R_Transcript_335795.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value4E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.38159500253767
Replicate 20.36578920585885
Replicate 30.079814416711333
Condition 2: 8 Hour
Replicate 10.68253282082913
Replicate 20.077912480282877
Replicate 30.18973809010858
Condition 3: 24 Hour
Replicate 10.39996179839206
Replicate 20.23054277585969
Replicate 30.22879133819056


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_335795.p1 GENE.R_Transcript_335795~~R_Transcript_335795.p1 ORF type:3prime_partial len:287 (+),score=30.71,DDE_Tnp_4|PF13359.2|8.8e-33,Plant_tran|PF04827.10|2.4e-11,DDE_Tnp_1|PF01609.17|3.3e-08 R_Transcript_335795:97-858(+)
ATGGAAGGTCTTTCGAGGGACATACTTGTGCCCAAGGATCCTGAATTCAAAGAACTTTCTCAACAAATTGCTAGTGATACTAGATATATGCCTCATTTTAAGGATTGTATTGGAGCTATTGATGGTACCCATATATCAGTAATTGTTCCGGAGGAGGATCAAATTCGGTATAGAGGAAGAAAGTTGACACCCACTACAAATGTCTCAGCAGTATGTGACTTTGATTTGCTTTTCACATATGTTTTAACTGGGTGGGAAGGATCAGCTCATGATACACGTATTTTTCTTGACACAATCAACGATCCAAGTCTCAAGTTTCCAAAACCTCCGGCAGGTAAATATTACTTGGTAGATAAAGGTTATCCAGAAAGAGAGGGATATCTAACACCTTATCCAAAAGTAAGATACCATCAGTCAGAGTTCCGAGGCACGAATCCAAGAGGATCTCGAGAAATTTTTAATCGAGCACATTCATCATTAAGAAGTTGTATTGAAAGGGCATTCGGTGTTCTCAAGGCCAGATGGAAGATATTGGATAAAATGCCCAAATATTCATTGATGGATCAAAATAAAATTATTTTTTCATGTTTTGCATTGCATAACTATATTAGAAAAAATGCAATTGGGGATCCTGCTTTCAGACTAATGGACGAAAATCCCGATTTTATACCACCAGAAGTCATGCAAGATATTGAAGGTGAAACCACTGAAGATGCACAAGAATATAGAACTAAAGAAATGACTACTATACGTGACAATATT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_335795.p1 GENE.R_Transcript_335795~~R_Transcript_335795.p1 ORF type:3prime_partial len:287 (+),score=30.71,DDE_Tnp_4|PF13359.2|8.8e-33,Plant_tran|PF04827.10|2.4e-11,DDE_Tnp_1|PF01609.17|3.3e-08 R_Transcript_335795:97-858(+)
MEGLSRDILVPKDPEFKELSQQIASDTRYMPHFKDCIGAIDGTHISVIVPEEDQIRYRGRKLTPTTNVSAVCDFDLLFTYVLTGWEGSAHDTRIFLDTINDPSLKFPKPPAGKYYLVDKGYPEREGYLTPYPKVRYHQSEFRGTNPRGSREIFNRAHSSLRSCIERAFGVLKARWKILDKMPKYSLMDQNKIIFSCFALHNYIRKNAIGDPAFRLMDENPDFIPPEVMQDIEGETTEDAQEYRTKEMTTIRDNI

Click here to download the sequence:
Link to NCBI Protein BLAST