Transcript Information: R_Transcript_33592.p1


Annotated TAIR IDAT1G20780.1
Annotated Gene Namesenescence-associated E3 ubiquitin ligase 1
Annotated Gene Symbol(s)PUB44, ATPUB44, SAUL1
Annotation TypeHomolog
Chromosome Positionchr1:7217812-7220609 | Forward length=801
E-Value3E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7201697091198
Replicate 25.5158066290179
Replicate 36.281233895014
Condition 2: 8 Hour
Replicate 16.5264338018544
Replicate 26.8390424806694
Replicate 36.5958393337744
Condition 3: 24 Hour
Replicate 16.3172489686971
Replicate 26.8935900271603
Replicate 36.0647618931096


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33592.p1 GENE.R_Transcript_33592~~R_Transcript_33592.p1 ORF type:complete len:1043 (+),score=209.54,U-box|PF04564.11|1.4e-15,U-box|PF04564.11|6.5e+03,Arm_2|PF04826.9|0.73,Arm_2|PF04826.9|0.97,Arm_2|PF04826.9|2.1,Arm_2|PF04826.9|2.5e+02,HEAT_2|PF13646.2|1.3e+03,HEAT_2|PF13646.2|37,HEAT_2|PF13646.2|1.3e+03,HEAT_2|PF13646.2|0.002,Adaptin_N|PF01602.16|0.055,Adaptin_N|PF01602.16|2.6e+02,Adaptin_N|PF01602.16|0.12 R_Transcript_33592:238-3366(+)
ATGCGAATGATGACGTCAAAGCTAGGAGGGGCCCCACAAGAAGCAGCAGCAACGGTGGTGGTGGAGTCAATCAACCGGCTACTGGCAGAGCCATGTCTCACAGACACCTTCCACTCATGGGACCCGCCTCGTCGGTTCACCGGCTATGCCCGTCGCCTGGAGGTCTTAGTCTCTCAAATACCACCCCAAGTATGTTCATCGCCCACAACCCAAACAGCACTTAAGGGAATCGCAACTGACCTTGCTAAAGCCCTCGAAACGCTGTCGCTTTATAGACACCGCAGCAGGATATTTGTGTTGATCAACTGCCGTTCGTTGTGCTCCGCCATTCAAGATCGGACGGCTGGGATTGCAGGGTGGTTAGCCTTGTTTCACACTGGCCTTTCTGCTTTTCCTGATCTTCGCAAGAAGGTTTCCGACCTTTCTAGAGACATGAAACTTGCTCCTTTCTCTGTGACGGAGAATGAGGAAAGAGTGTACTGCACCTTACAAAGAGAAGGGCAAGGAAGGCCAACAACCAAAGTAGTTCAGAGTGCTATCATTATGGATTTGGCTCGAGCTCTAGGGATTGACCCCAGTAACTATGCTGAGATATCGGAACAGGTTAAGCTTTTAAAGAATGATCTTGCTCACTCAAATTCAGTCTCCGAGAGGCGGATTTTAATGTCTCTTGAGAGAATTGTTGACAGCTTGTCCATTGAGCCTAACATTTCAGTTATAAGCTCGGATTTTGATATGGAGGATGATTCTCAAATTTTGCCTTTCAAGAGCTTTCTGTGTCCCTTAACCAAGGAGGTTATGAAGGATCCTGTTGTGTTGGAGTCATCACAGACTTATGAGCGTACTGCAATTGAGTATTGGTTTCAGCGTTGCTTAGAGGATGGCCGTGATCCTACTTGTCCAGTTACAGGCCAGGTCCTGAGCTCGTTGGAGCAGAAGCCAAACATTGGCTTAGCAGGGGCTATTGAAGAGTGGGTTAATAGAAATGTTGAGGGCCAAATTAAGTTGGCTGTAAAATATCTTAGTGAGGATCCTCTGCCAATGGAGTATGCTGAACGAGTTTTGGATAGCATTTATAAGATTTCAGAAGAGCACCCATCAAGCAGATATAAAATTAGAAATGCAGGGATTGTCTTTCTTATCATCAATTTGCTCAAGAATTGTTTGAAGGGTGGCAATCCGATTTTGAAAACCAAGGCTTTATTAGCTTTGCTTAGCATGGCAAATGATGAAGATAGCAAGACAACTATGCTTGGAGAAGGCATCACCAAATTGGCAATAAAAAGTCTAGGTGGGAGCACAGATAAAGAGAAAGAGATAGCTCTAAAGCTATTGCTTGAGTTTTCGATCACTGAAGCTTATTGTGCAAAAATCGCATCTGAGAAAGGTGCATTCCTTCTTCTTTCAAGCTTGGCGGAGAATCTGGAGCATCCTGCTTCATCCAATTTAGCTAGGGATGTGCTAAAACGCCTGGAAATGGTGGATGAAAATGTTGAACTTTTGGCTGCAGCTGGAAGATATGAACCTTTATTGAGTCGACTCTGTGAAGGTTCTGACAGTGTCCAAATAGAGATGGCATCATTATTGGGCAAGATGGCTTTGACAAATACAAGTAAAGAACAAATTGCCAGGCGAAGTGCAAAAGTACTTGTTGAGATGCTGCAGAAACCAGGAGGCAGGACTGCAGGCCTTCGAGCATTGCACAATCTTTCATCCTTGGATGACAATACAACTATTCTGGTAGAATCCTCTGTGCTTGCGGCTGTCACGGACATTCTCCTTGAATCTCACAGTGTCCTTCCTGAGCAGAAGGAGCTAGCTGCTGCAATAGTTGCTAACATCGTGTCAAAGCCAGGGCACTGGGAGTTGGCAGTGGTGAACAAGGATGGGCACACTATGCATTCATCGATCATTATCTCTCATCTAATGCAGCTCTTATCCCAAGTTACTCCTCAGTGCGAAGTGTCAGTTCTTCAAATCCTTTATGGCGTTGCTTCTTCTCCCAAGGCATCTGAACAGGTAGCAAAGGAAATAAAATCTGGGGATGGCATCAAAACAATTGCTCAGTACCTTGAACACTCAGAGACTAATCATTGGGCTTCTGCTTTAAAGCTTATGAAAGTACTATCTGAAAGCTCTGGCAAAGATCTCTGTGAAGAGTTCAGACATTTAAACAAACTCCAGCTTTTACGAGACAAACTGCAGGATAACCTGTCAACAGTTAGTGAGCGGTCTGATGCTGCATGCATACTTGCAAATCTCCCCCTGTCGGAGGACGAGGTGAGAACAGTTCTGGGGGCTGGTTTCCTGAAATGGACAGTTATGACCCTCAAAGAACAACAACGAAGCCCAAGTGGAAGAATATTACGATCGACATCAAGCATGGTGGAAGGGCTAATTGGTCTTTTACTCCACTTTGCAAGGAGCATGGACCCACAAATCCTGGCTTGGGTTAGGGAGCATCACCTCATGGCAATCTTCCATGACCAGCTTAGCTTCCTTTCACAACCTAGAAGTAAACAACTAGCAGTCATTGGATTGAAACACCTGTCAGAATCTGGGAGAGAACTTGCTGGAGATGAAGAATCAGAGCCATTAGCCCCTCAAGGTTTCTGCTACCCGATGGTGTTCATATGTGGAAGACCAGCACTAGAGCCGTCAACCTGTCCAATACACAATGCTCCTTGTGACAAAGATACTGAATTGTGCTTGCTCAAGAGTGACTGCATCAAACCCCTACTCGATCTCCTTCATGATGAGCACACGGATATTCAAATTGCTGCTGTAGAGGCACTTTCCACTCTGATCCCCGACTCACCTCATACTTTCAAGCGTGCCATTGATGAGCTCGACCAACTAGGCATGGTAGATGACATAGTAGCCCTTTTTACAGAGATTCGACCTGGAGAGCTCCAAGAAAAGATAATCTGGATGGTTGAGAGGCTGTTAAGAGGTGAATACACAAGCCAAAGACTTTCTCTTAACCAGTCTTTGGTTAGGGCTTTAGTGGAAGCCATGAAGCATGGGAATGCCAAGACAAGACAGCTTGCTCAAGATGCTCTTACTAATCTAAGGCAGATTTCCGGCGCTAGTGGGAAGATTTCTACTCCAATTCGCCCACGGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33592.p1 GENE.R_Transcript_33592~~R_Transcript_33592.p1 ORF type:complete len:1043 (+),score=209.54,U-box|PF04564.11|1.4e-15,U-box|PF04564.11|6.5e+03,Arm_2|PF04826.9|0.73,Arm_2|PF04826.9|0.97,Arm_2|PF04826.9|2.1,Arm_2|PF04826.9|2.5e+02,HEAT_2|PF13646.2|1.3e+03,HEAT_2|PF13646.2|37,HEAT_2|PF13646.2|1.3e+03,HEAT_2|PF13646.2|0.002,Adaptin_N|PF01602.16|0.055,Adaptin_N|PF01602.16|2.6e+02,Adaptin_N|PF01602.16|0.12 R_Transcript_33592:238-3366(+)
MRMMTSKLGGAPQEAAATVVVESINRLLAEPCLTDTFHSWDPPRRFTGYARRLEVLVSQIPPQVCSSPTTQTALKGIATDLAKALETLSLYRHRSRIFVLINCRSLCSAIQDRTAGIAGWLALFHTGLSAFPDLRKKVSDLSRDMKLAPFSVTENEERVYCTLQREGQGRPTTKVVQSAIIMDLARALGIDPSNYAEISEQVKLLKNDLAHSNSVSERRILMSLERIVDSLSIEPNISVISSDFDMEDDSQILPFKSFLCPLTKEVMKDPVVLESSQTYERTAIEYWFQRCLEDGRDPTCPVTGQVLSSLEQKPNIGLAGAIEEWVNRNVEGQIKLAVKYLSEDPLPMEYAERVLDSIYKISEEHPSSRYKIRNAGIVFLIINLLKNCLKGGNPILKTKALLALLSMANDEDSKTTMLGEGITKLAIKSLGGSTDKEKEIALKLLLEFSITEAYCAKIASEKGAFLLLSSLAENLEHPASSNLARDVLKRLEMVDENVELLAAAGRYEPLLSRLCEGSDSVQIEMASLLGKMALTNTSKEQIARRSAKVLVEMLQKPGGRTAGLRALHNLSSLDDNTTILVESSVLAAVTDILLESHSVLPEQKELAAAIVANIVSKPGHWELAVVNKDGHTMHSSIIISHLMQLLSQVTPQCEVSVLQILYGVASSPKASEQVAKEIKSGDGIKTIAQYLEHSETNHWASALKLMKVLSESSGKDLCEEFRHLNKLQLLRDKLQDNLSTVSERSDAACILANLPLSEDEVRTVLGAGFLKWTVMTLKEQQRSPSGRILRSTSSMVEGLIGLLLHFARSMDPQILAWVREHHLMAIFHDQLSFLSQPRSKQLAVIGLKHLSESGRELAGDEESEPLAPQGFCYPMVFICGRPALEPSTCPIHNAPCDKDTELCLLKSDCIKPLLDLLHDEHTDIQIAAVEALSTLIPDSPHTFKRAIDELDQLGMVDDIVALFTEIRPGELQEKIIWMVERLLRGEYTSQRLSLNQSLVRALVEAMKHGNAKTRQLAQDALTNLRQISGASGKISTPIRPRR*

Click here to download the sequence:
Link to NCBI Protein BLAST