Transcript Information: R_Transcript_33597.p1


Annotated TAIR IDAT2G42360.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:17640907-17641617 | Forward length=236
E-Value9E-35
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1192576389374
Replicate 21.8086700733141
Replicate 31.5442744446844
Condition 2: 8 Hour
Replicate 12.2926839838245
Replicate 24.9411686465541
Replicate 34.2149807433108
Condition 3: 24 Hour
Replicate 13.0954346823871
Replicate 22.1477031129401
Replicate 32.3773162394008


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33597.p1 GENE.R_Transcript_33597~~R_Transcript_33597.p1 ORF type:complete len:267 (+),score=37.05,zf-RING_2|PF13639.2|2.9e-13,zf-RING_11|PF17123.1|1.5e-09,zf-RING_11|PF17123.1|2.8e+03,zf-rbx1|PF12678.3|5.1e-09,zf-C3HC4|PF00097.21|2.8e-06,zf-RING_5|PF14634.2|1e-05,zf-C3HC4_2|PF13923.2|1.1e-05 R_Transcript_33597:268-1068(+)
ATGTCAAACCTTCTCAACACTCCTCCTACACCCACCATGGATTTCGACAACAATCAAAATTTCCACCACCAAAACCCAATCTACCACAGGAACAACACTTATGACCTCAACAGCAGAATCATGCTCACAGCTGTCCTTTCTCTCGGCTTCGTCATCGTCCTAGTCATCATCCTCCACATATACGCTAGGTGTGTCCTCCGCTCACCTCACGGCCGCCTCGCCACCGCCCTCTCCACCCTCAGCCACCGCCATACGCCTCCTTCCGAGGCGCCCAAATCCGGGCTTGACCCGATTGTCATCCAAGCTCTGCCTTCCTTCTTGTACAAGCAATCCAACGGCCAGCAGGAGGATCAGATTGAGTGTTCTGTTTGCTTGAGCTATTTGGAGGAGGGTGAGCTGGCAAGGAAGTTGCCTAATTGTAGCCATGTTTTTCACATGGCTTGCATTGATATGTGGCTCACTGGCCAGTCCACGTGTCCTGTTTGTCGGTCCGAGGCGGCCCCACGGATGGCCCCACACGAGCGTGAACCGCCAATGAGAAGCCAGCAGCTGGAGGTGGTGGTTCCGGTGGTGGTTGGTTCGGAGAGTCATGTCCAAAATGAGATTGAGCATGATTTATTACAAGGTAATTGTAATGAAACTAGTAATAAAGCAAACAGTAGTACTGGGATTGCACCAACAACAACATCAAGCTTTAGATTGAGCTCTTTTAGAAGGATGCTTGGTAGAGATAGATCATCTTCTTCAAGGAGAATTCAAGTTTGTGGTGAGTTAGATCTTGAGAGACAGGGGAACCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33597.p1 GENE.R_Transcript_33597~~R_Transcript_33597.p1 ORF type:complete len:267 (+),score=37.05,zf-RING_2|PF13639.2|2.9e-13,zf-RING_11|PF17123.1|1.5e-09,zf-RING_11|PF17123.1|2.8e+03,zf-rbx1|PF12678.3|5.1e-09,zf-C3HC4|PF00097.21|2.8e-06,zf-RING_5|PF14634.2|1e-05,zf-C3HC4_2|PF13923.2|1.1e-05 R_Transcript_33597:268-1068(+)
MSNLLNTPPTPTMDFDNNQNFHHQNPIYHRNNTYDLNSRIMLTAVLSLGFVIVLVIILHIYARCVLRSPHGRLATALSTLSHRHTPPSEAPKSGLDPIVIQALPSFLYKQSNGQQEDQIECSVCLSYLEEGELARKLPNCSHVFHMACIDMWLTGQSTCPVCRSEAAPRMAPHEREPPMRSQQLEVVVPVVVGSESHVQNEIEHDLLQGNCNETSNKANSSTGIAPTTTSSFRLSSFRRMLGRDRSSSSRRIQVCGELDLERQGNH*

Click here to download the sequence:
Link to NCBI Protein BLAST