Transcript Information: R_Transcript_336475.p1


Annotated TAIR IDAT1G78520.1
Annotated Gene NameCarbohydrate-binding X8 domain superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29537976-29538656 | Reverse length=115
E-Value3.7E-43
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.34140325880159
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.29514814016889
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.53384645577798


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_336475.p1 GENE.R_Transcript_336475~~R_Transcript_336475.p1 ORF type:3prime_partial len:123 (+),score=16.91,X8|PF07983.9|2.1e-19 R_Transcript_336475:172-537(+)
ATGGCGGCTACACCATCCTTCTCTCTCCTCTCTCTCCTCATCCTCCTATTCTTCATTTCAGGTGAGCTTTCAACAGTGGCTAATGGGCAGAAGACATGGTGTGTAGCCAAGCCATCTTCAGATGCGGCAACACTGTTAGCAAACATAGACTATGCGTGCTCACAAGTGGATTGTAGAGTTCTACAAAATGGGTGTCCTTGCTTCTCTCCTGATAATCTCATTAACCATGCCTCCATTGCGATGAACCTTTATTACAGAGCCAAGGGCTGTAATAAGTGGAATTGTGACTTCAGGGGTTCTGCCCTCATTGTTATTACTAATCCCAGTGAGTTCTCTCTTTTTTCCCACCTTGATGTACTCTCTCTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_336475.p1 GENE.R_Transcript_336475~~R_Transcript_336475.p1 ORF type:3prime_partial len:123 (+),score=16.91,X8|PF07983.9|2.1e-19 R_Transcript_336475:172-537(+)
MAATPSFSLLSLLILLFFISGELSTVANGQKTWCVAKPSSDAATLLANIDYACSQVDCRVLQNGCPCFSPDNLINHASIAMNLYYRAKGCNKWNCDFRGSALIVITNPSEFSLFSHLDVLSL

Click here to download the sequence:
Link to NCBI Protein BLAST