Transcript Information: R_Transcript_336542.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97534905864909
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.56074499879188
Replicate 21.0241625270772
Replicate 30.41568573939817
Condition 3: 24 Hour
Replicate 10.87625218426352
Replicate 21.1785252842293
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_336542.p1 GENE.R_Transcript_336542~~R_Transcript_336542.p1 ORF type:5prime_partial len:131 (+),score=12.78 R_Transcript_336542:2-394(+)
TCTCCTGATGTTTGTGTAATGTGTGGGGTTAGTGGTGAGTCAACTTCTCATTTATTTTTGCAGTGCAAGCTGGCACGGGCTCTTCGGGGTAAGCTCTTTGGTGTGAAGGGGGAAGTGATGGTGTGTCCTGCGACGGTCCTCGATTTCTTGCAGATTCGTCATGAAGGTTTCGGGAGGGATAAGGAGCTGAGGGTCCTTTGGAGAAACACTTTGTTAGCTGTTTTTTGGTGCATCTGGTTGAAACGTAATGCTAGGGTGTTTTCCAACACTTTTTTATCGCTGGAGCTTCTTTGGGAGCAAATAACTTTTTTGGCTACCTTGTGGAGTAAGGCGGCTGGGGCTTTTCGAAGGTATACTATTAGCGGGGTCCAACATAATTGGGCCTCCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_336542.p1 GENE.R_Transcript_336542~~R_Transcript_336542.p1 ORF type:5prime_partial len:131 (+),score=12.78 R_Transcript_336542:2-394(+)
SPDVCVMCGVSGESTSHLFLQCKLARALRGKLFGVKGEVMVCPATVLDFLQIRHEGFGRDKELRVLWRNTLLAVFWCIWLKRNARVFSNTFLSLELLWEQITFLATLWSKAAGAFRRYTISGVQHNWASL*

Click here to download the sequence:
Link to NCBI Protein BLAST