Transcript Information: R_Transcript_33687.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value8E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6093335744239
Replicate 22.3329222684776
Replicate 36.015910883838
Condition 2: 8 Hour
Replicate 15.193971352446
Replicate 25.872554826978
Replicate 35.8671872712362
Condition 3: 24 Hour
Replicate 16.7250142384184
Replicate 26.0150706065211
Replicate 36.411549857778


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33687.p1 GENE.R_Transcript_33687~~R_Transcript_33687.p1 ORF type:complete len:99 (+),score=25.86,CENP-X|PF09415.6|6.2e+03,CENP-X|PF09415.6|1.2e-07 R_Transcript_33687:109-405(+)
ATGGATGAAACCTTCGATCCTAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGCCAATGCAAATGCTGTAAAACTGAGTTGTGAACTGCTTCAAGTCTTCATCACAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGAAGCTGAGGGTGTTAGTCAGATAGAAGAGGAAGCTGGTTTTGGAGTATTGCCAAAATTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33687.p1 GENE.R_Transcript_33687~~R_Transcript_33687.p1 ORF type:complete len:99 (+),score=25.86,CENP-X|PF09415.6|6.2e+03,CENP-X|PF09415.6|1.2e-07 R_Transcript_33687:109-405(+)
MDETFDPNLVHAIFKLIWRRKALERERNEISETLDPEGGPGTSKKNRPTSANANAVKLSCELLQVFITEAIQRAAAVAEAEGVSQIEEEAGFGVLPKL*

Click here to download the sequence:
Link to NCBI Protein BLAST