Transcript Information: R_Transcript_33703.p1


Annotated TAIR IDAT1G78790.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29623930-29624785 | Reverse length=104
E-Value1.2E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.455579576004
Replicate 29.3769885354341
Replicate 38.673424915048
Condition 2: 8 Hour
Replicate 15.7054442595523
Replicate 28.4667416680217
Replicate 310.573753759449
Condition 3: 24 Hour
Replicate 110.698783950775
Replicate 29.6357927191843
Replicate 37.8625735283029


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33703.p1 GENE.R_Transcript_33703~~R_Transcript_33703.p1 ORF type:complete len:103 (+),score=22.50,CENP-X|PF09415.6|6.6e+03,CENP-X|PF09415.6|5.7e-16 R_Transcript_33703:109-417(+)
ATGGATGAAACCTTCGATCCTAATCTTGTTCACGCCATTTTCAAGCTCATTTGGCGTCGAAAAGCTCTAGAGAGAGAAAGGAACGAAATTTCCGAAACCCTAGACCCTGAGGGAGGACCAGGGACATCTAAGAAAAATCGACCGACATCAGCCAATGCAAATGCTGTAAAACTGAGTTGTGAACTGCTTCAAGTCTTCATCACAGAGGCCATTCAAAGGGCTGCTGCAGTGGCTGAAGCTGAGGGTGTTAGTCAGATAGAAGGTACTCATCTGGAACGAATTCTTCCACAGTTACTCCTTGACTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33703.p1 GENE.R_Transcript_33703~~R_Transcript_33703.p1 ORF type:complete len:103 (+),score=22.50,CENP-X|PF09415.6|6.6e+03,CENP-X|PF09415.6|5.7e-16 R_Transcript_33703:109-417(+)
MDETFDPNLVHAIFKLIWRRKALERERNEISETLDPEGGPGTSKKNRPTSANANAVKLSCELLQVFITEAIQRAAAVAEAEGVSQIEGTHLERILPQLLLDF*

Click here to download the sequence:
Link to NCBI Protein BLAST