Transcript Information: R_Transcript_33721.p1


Annotated TAIR IDAT5G43960.1
Annotated Gene NameNuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17689154-17691653 | Reverse length=450
E-Value8E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 181.209523185707
Replicate 276.599334925831
Replicate 379.565438110529
Condition 2: 8 Hour
Replicate 171.994943617011
Replicate 282.764945398902
Replicate 394.613262437238
Condition 3: 24 Hour
Replicate 1107.678210891
Replicate 2101.4932267531
Replicate 393.652258549689


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33721.p1 GENE.R_Transcript_33721~~R_Transcript_33721.p1 ORF type:complete len:452 (+),score=117.87,NTF2|PF02136.16|5.7e-22,RRM_1|PF00076.18|1.2e-09,RRM_6|PF14259.2|6.9e-08 R_Transcript_33721:417-1772(+)
ATGGCGTCTGGGGCTGTTTCCTCCTTTGAGGTTGGTTCGTACTTTATGAATCAGTACTACAGAGTGTTGAAGGAGTCACCAGATTATTCTCATCAGTTTTACAAGGAGACTAGTACCGTTACTCGAGTTGATGGCGATGATTCTCAAACTGTTTCTAACATTATGGATATTCATGCGCTACTCACATCTCTAAATGTTACTGGAATTGAAGTCACAAAGCTAAGTTGCCAAGATTCATGGAATGGAGGCATTCTGCTTATAGTGTCGGGCTTTGTAAGGTCTGGTAACTTTCCTGGTAAGAGGAAGTTCACACAGGTCTTCTTCTTAGCTCCACAGGAGAAGGGTTACTTTGTCCTGAATGATGTTTTCCAGTTCAATGAGGAAGTCTCAGTTGCCCAGCATCCAGTGGCTGAGATACCTGAAATCAAGGTTGACTCTGAAGTGCATGCCTCTAGTCCTCACTTAGAGCAGCCAGCATCTAACTATGAGTTGGAAGAAGACACAAGAGAGTATGTTAATTCACTTCATATTGAAGAAGATAATCCCGTAGATAAATATAGCCTTCCGGATGAACAGCAGTATGAAGAACCTCAATCTGAAACTGTAGTAAAAGAAGCTCCTGTGGAAGAGCCTCCTCCAGTTGAGAGTGCAGTAAACCATGTGAACCATGTGGAAGACTCAATACCTGTGACTGCCCACGAGCCTGCTGGGGAGCCTACCAAGTTATCATATGCATCTATTTTGCGAGCAGCAAAGGGACATCCTGCACCACCAGTTGTGTCTCAACCAGCTGTGAGACAGAGTGCTCCACCTCCACCAGAGCAGCATCAGAGAGTACAAACTAGTTCTCCACAATTAAATCCATCAGCTTCATCATTTGTTCCTGAAGCAGGTGGTGCTGGGGCAGATGAAGCTCTAATTCAAGATGAAGGTGAGCTGACATCGGTTTATGTAAGGAGCTTGCCCTCCAATGTTACAAATGCTGATCTTGAGAAGGAGTTCAAGAAGTTTGGTAGGATTAAACCTAATGGAGTCTTCATTAGGAATCGGAAGGAAATAGGAGTCTGCTTTGCATTTGTCGAGTTTGAAGACATGTCTGGTGTACACAATGCAATTAAGGCTTCTCCCATAGAGGTGCTTGGTAGGCAAGTTTTCATTGAGGAGAGGAGAGCAGGAAGCGGTGGAACTCGAGGTGGTGGAGTTGCGCCAAGAGGCAGAGGCCGAGGCCGAGGCAGTTACCCAAATGAATCATCGAGGGGTCGTGGTGGCATCAGAAGCCCTGGTCGAGGAAGTGTTCTTGATGGTACTGACTACAACAGAGTGAGAGGTAACGGGTTTCAGCAGCGTACCCAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33721.p1 GENE.R_Transcript_33721~~R_Transcript_33721.p1 ORF type:complete len:452 (+),score=117.87,NTF2|PF02136.16|5.7e-22,RRM_1|PF00076.18|1.2e-09,RRM_6|PF14259.2|6.9e-08 R_Transcript_33721:417-1772(+)
MASGAVSSFEVGSYFMNQYYRVLKESPDYSHQFYKETSTVTRVDGDDSQTVSNIMDIHALLTSLNVTGIEVTKLSCQDSWNGGILLIVSGFVRSGNFPGKRKFTQVFFLAPQEKGYFVLNDVFQFNEEVSVAQHPVAEIPEIKVDSEVHASSPHLEQPASNYELEEDTREYVNSLHIEEDNPVDKYSLPDEQQYEEPQSETVVKEAPVEEPPPVESAVNHVNHVEDSIPVTAHEPAGEPTKLSYASILRAAKGHPAPPVVSQPAVRQSAPPPPEQHQRVQTSSPQLNPSASSFVPEAGGAGADEALIQDEGELTSVYVRSLPSNVTNADLEKEFKKFGRIKPNGVFIRNRKEIGVCFAFVEFEDMSGVHNAIKASPIEVLGRQVFIEERRAGSGGTRGGGVAPRGRGRGRGSYPNESSRGRGGIRSPGRGSVLDGTDYNRVRGNGFQQRTQ*

Click here to download the sequence:
Link to NCBI Protein BLAST