Transcript Information: R_Transcript_337574.p1


Annotated TAIR IDAT4G16835.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9472763-9474803 | Forward length=656
E-Value2.5E-293
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.73228818094711
Replicate 20.59276331041555
Replicate 30.68073514401642
Condition 2: 8 Hour
Replicate 10.4002147316786
Replicate 20.53161086100887
Replicate 30.53942379258208
Condition 3: 24 Hour
Replicate 10.88692865961413
Replicate 21.0159183144248
Replicate 31.0732455492832


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_337574.p1 GENE.R_Transcript_337574~~R_Transcript_337574.p1 ORF type:complete len:673 (+),score=105.74,PPR_2|PF13041.2|0.00052,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|7.2e-06,PPR_2|PF13041.2|4.9e-06,PPR_2|PF13041.2|4.6e-05,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|9.8e-14,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|1.1e+04,PPR|PF01535.16|0.0042,PPR|PF01535.16|6,PPR|PF01535.16|8.2e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|3.7e-05,PPR|PF01535.16|7.7e-09,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|2.2e-09,PPR|PF01535.16|4.5,PPR|PF01535.16|0.0016,PPR|PF01535.16|20,PPR|PF01535.16|1.6e+04,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|9e-07,PPR_1|PF12854.3|8.7e-05,PPR_1|PF12854.3|0.00093,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|8.7e-06,PPR_1|PF12854.3|0.016,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|59,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|5.9e+02,PPR_3|PF13812.2|0.83,PPR_3|PF13812.2|20,DYW_deaminase|PF14432.2|7.1e-42,TPR_14|PF13428.2|86,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|9.1e+03,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|3.7e+03,TPR_14|PF13428.2|3.8e+02,TPR_14|PF13428.2|9.1e+02,TPR_14|PF13428.2|4.7e+02,TPR_14|PF13428.2|34,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|57,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|5.8e+02,TPR_19|PF14559.2|5.7e+03,TPR_19|PF14559.2|5.1e+03,TPR_19|PF14559.2|5.9e+03,TPR_19|PF14559.2|2.2,TPR_16|PF13432.2|9e+02,TPR_16|PF13432.2|1.1e+03,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|2.9e+03,TPR_16|PF13432.2|0.017 R_Transcript_337574:378-2396(+)
ATGAATCACCTCATCCACAATAACCCAGTAAAAAACCCTTCTTTACTTACCCTGCACATCCTCTCTTACGTTCGCAAACACCCAATATGTTTCTTTTCTATCTCCCCAACTCACAACCCACATGATAACAAAAGAACAAATCAGGGTCCTTCCAAATATTTGGTTCCCCCCAATAACTTGAAAAGCCAAGCATCATATCCCAGTCCGTATTTTGATGGTAATTACAATGATGTCATTGCTTGTAATAGATTGATTACAAGCCACATTAGGGCAGGTGATTTAGAATCTGCTCTTAAAGTGTTTAGTAGAATGCCCATCAAGTCTGTTATCACTTGGAATTCATTACTAGTAGGGTATTCGAAAAAACCAGGGAAACTAACTCAAGCACGCCAACTGTTTGACAAAATTCCTGAACCAGATGTTTTCTCGTTTAATACCATGTTGTCCTGTTATTTGCGGAATTCGGATGTTGATAGTGCTAGGCAATTCTTTGAGCAAATGCCCATCAAGGATATTGCTTCTTGGAATAGTATGGTTTCGGGTTTTGCTGAGAATGGGATGATGGAGGAAGCTCAGAGACTGTTTTCGTCGATGCCCGAGAGGAATAGTGTGTCTTGGAATGTAATGATTTCGGGTTATGTGGATTGTGGGGATTTGGATTCAGCGTTGAGGTTGTTTAGTTTGGACCCATTTAAGAGTGTTGTTGCTTGGACTACGTTGATAACTGGATACATGAAGGTGGGGAAAGTTGAGTTGGCTGAGAGAATATTCGAGGAAGTGCCTATGAAGAGCTCTGTGACTTGGAATGCTATGATTTCTGGTTATGTTGAGAATTCTAGAGCAGAGGATGCCGTGAGGCTTTTCAAGATGATGGTGGAATCTGGGGTCAGGGCGACTCCGTTAACCATGACTAGTGCTTTGTTGGGTTGTAGTAATATTTCTGCATTGGTGTTAGGCAAACAAATTCACCAATTTTTGCGCAAGTCCCAGTTATACTTGGATACAACTGTTGGAACTTCATTGTTGAGTATGTACTGCAAATGTGGAGTTTTGGAGGATGCATGGAAGTTGTTTATGGAGATGCCAAGGAAAGACTTGGTGACTTGGAATGCTATGATTTCTGGTTATGCAACTCATGGTGATGGTGAAAAAGCTCTTGCTCTATTTGATAAGATGAGAAACAATAAGATAAAGCCAGATTGGATCACCTTTGTTGGGGTTTTGTCGGCTTGCAACCACACTGGATTGGTAGAACTTGGGATGCAATATTTCGAGTCAATGCAGGGAGATTATGGTGTTGAGGCTAAACCAGAGCACTATTCATGCATGGTTGACCTACTAGGCCGTGCTGGTAAGCTAAAAGAAGCTACTGACTTGATAGAAAAAATGCCATTTAAACCACATGCCGCTATATTTGGGAGCCTTTTAGGAGCCTCGAGGATCCACAAGAACATAGAGTTGGCTGAGTTTGCTGCAAACAACTTGCTTAGAATTGATCCTTCAAACGCTGCAGCATATGTGCAGCTCGGTAATGTTTATGCAGCAAGGGGTAGGTGGGACAATGTCTCTAGGGTTTGGCAGTTGATGAAGGGTAATAGCATTGGTAAGATGCCAGGCTACAGTTGGATAGAGATAAAGAGTGTAGTTCATGAGTTCAGATCAAGCGACAAAGAACACCCAGAATTGCCCTTGATACACGAAAAGCTGCAGGAGCTAGAGAAGAAAATGAAGTGTGCAGGTTATACGCCTGATCTTGAATTTGCGTTGCATGATGTTAGTAGGGGGCAAAAAGAAAAGCTTCTATTATGGCACAGTGAGAAACTGGCAATTGCTTACGGTCTGATTAAGGTGCCTCTAGGCTTGCCAATACGTGTGTTTAAGAATCTTAGAGTATGTGGGGATTGTCATAAAGCTATAAAGTACATATCAGCCATTGAAGGTAGGGAAATAATTCTAAGAGATAATACTAGGTTTCACCATTTCAAAAATGGGAGCTGCTCTTGTGGTGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_337574.p1 GENE.R_Transcript_337574~~R_Transcript_337574.p1 ORF type:complete len:673 (+),score=105.74,PPR_2|PF13041.2|0.00052,PPR_2|PF13041.2|0.045,PPR_2|PF13041.2|7.2e-06,PPR_2|PF13041.2|4.9e-06,PPR_2|PF13041.2|4.6e-05,PPR_2|PF13041.2|1.9e-05,PPR_2|PF13041.2|1.5e-10,PPR_2|PF13041.2|1.6e-05,PPR_2|PF13041.2|9.8e-14,PPR_2|PF13041.2|1.6e+03,PPR_2|PF13041.2|1.2,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|1.1e+04,PPR|PF01535.16|0.0042,PPR|PF01535.16|6,PPR|PF01535.16|8.2e-05,PPR|PF01535.16|1.3e-07,PPR|PF01535.16|1.9e-05,PPR|PF01535.16|3.7e-05,PPR|PF01535.16|7.7e-09,PPR|PF01535.16|4.4e-05,PPR|PF01535.16|2.2e-09,PPR|PF01535.16|4.5,PPR|PF01535.16|0.0016,PPR|PF01535.16|20,PPR|PF01535.16|1.6e+04,PPR_1|PF12854.3|0.033,PPR_1|PF12854.3|1.6,PPR_1|PF12854.3|9e-07,PPR_1|PF12854.3|8.7e-05,PPR_1|PF12854.3|0.00093,PPR_1|PF12854.3|0.00024,PPR_1|PF12854.3|0.00034,PPR_1|PF12854.3|0.002,PPR_1|PF12854.3|8.7e-06,PPR_1|PF12854.3|0.016,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|59,PPR_3|PF13812.2|0.0024,PPR_3|PF13812.2|0.016,PPR_3|PF13812.2|0.13,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.00063,PPR_3|PF13812.2|0.48,PPR_3|PF13812.2|4.1e-05,PPR_3|PF13812.2|5.9e+02,PPR_3|PF13812.2|0.83,PPR_3|PF13812.2|20,DYW_deaminase|PF14432.2|7.1e-42,TPR_14|PF13428.2|86,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.3e+03,TPR_14|PF13428.2|9.1e+03,TPR_14|PF13428.2|1e+03,TPR_14|PF13428.2|3.7e+03,TPR_14|PF13428.2|3.8e+02,TPR_14|PF13428.2|9.1e+02,TPR_14|PF13428.2|4.7e+02,TPR_14|PF13428.2|34,TPR_19|PF14559.2|2.2e+02,TPR_19|PF14559.2|57,TPR_19|PF14559.2|1.5e+03,TPR_19|PF14559.2|5.8e+02,TPR_19|PF14559.2|5.7e+03,TPR_19|PF14559.2|5.1e+03,TPR_19|PF14559.2|5.9e+03,TPR_19|PF14559.2|2.2,TPR_16|PF13432.2|9e+02,TPR_16|PF13432.2|1.1e+03,TPR_16|PF13432.2|2.6e+03,TPR_16|PF13432.2|2.9e+03,TPR_16|PF13432.2|0.017 R_Transcript_337574:378-2396(+)
MNHLIHNNPVKNPSLLTLHILSYVRKHPICFFSISPTHNPHDNKRTNQGPSKYLVPPNNLKSQASYPSPYFDGNYNDVIACNRLITSHIRAGDLESALKVFSRMPIKSVITWNSLLVGYSKKPGKLTQARQLFDKIPEPDVFSFNTMLSCYLRNSDVDSARQFFEQMPIKDIASWNSMVSGFAENGMMEEAQRLFSSMPERNSVSWNVMISGYVDCGDLDSALRLFSLDPFKSVVAWTTLITGYMKVGKVELAERIFEEVPMKSSVTWNAMISGYVENSRAEDAVRLFKMMVESGVRATPLTMTSALLGCSNISALVLGKQIHQFLRKSQLYLDTTVGTSLLSMYCKCGVLEDAWKLFMEMPRKDLVTWNAMISGYATHGDGEKALALFDKMRNNKIKPDWITFVGVLSACNHTGLVELGMQYFESMQGDYGVEAKPEHYSCMVDLLGRAGKLKEATDLIEKMPFKPHAAIFGSLLGASRIHKNIELAEFAANNLLRIDPSNAAAYVQLGNVYAARGRWDNVSRVWQLMKGNSIGKMPGYSWIEIKSVVHEFRSSDKEHPELPLIHEKLQELEKKMKCAGYTPDLEFALHDVSRGQKEKLLLWHSEKLAIAYGLIKVPLGLPIRVFKNLRVCGDCHKAIKYISAIEGREIILRDNTRFHHFKNGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST