Transcript Information: R_Transcript_33812.p1


Annotated TAIR IDAT5G07350.2
Annotated Gene NameTUDOR-SN protein 1
Annotated Gene Symbol(s)Tudor1, AtTudor1, TSN1
Annotation TypeOrtholog
Chromosome Positionchr5:2320021-2324892 | Reverse length=1007
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 173.222528572812
Replicate 244.702511589369
Replicate 356.173185479757
Condition 2: 8 Hour
Replicate 156.49991292654
Replicate 259.902761112851
Replicate 389.215261433256
Condition 3: 24 Hour
Replicate 181.327971879044
Replicate 273.316957151468
Replicate 376.205041081978


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33812.p1 GENE.R_Transcript_33812~~R_Transcript_33812.p1 ORF type:3prime_partial len:953 (+),score=260.34,SNase|PF00565.13|1.6e-11,SNase|PF00565.13|1.3e-14,SNase|PF00565.13|0.033,SNase|PF00565.13|0.017,SNase|PF00565.13|2.5e-13,SNase|PF00565.13|0.017,TUDOR|PF00567.20|1.1e+03,TUDOR|PF00567.20|7.7e-21,Agenet|PF05641.8|1.9e+03,Agenet|PF05641.8|1.6e+04,Agenet|PF05641.8|1.6e+04,Agenet|PF05641.8|5.2e+02,Agenet|PF05641.8|0.00027 R_Transcript_33812:268-3123(+)
ATGGCAACTGCACCAGCAGCTGGAAAATGGTTGAGGGGGATGGTGAAGGCTGTTCCTTCTGGGGACAGTTTGGTAATTATGGGTATTCCCAAGGGGGATGCTATTCCTCCTGAAAGGACTGTAACATTATCATCTCTTATGGCTCCGAGACTGGCTCGTAGAGGTGGATATGATGAGCCCTTTGCATGGGAAAGCAGAGAATACTTGAGGAAACTCTGTGTAGGAAAGGAGGTAACTTTCCGAGTGGACTACACCGTTTCATCAATAGGGAGGGAGTTTGCTACCGTGTTTGTTGGAGACAAGAATGTTGGAATGCTGGTGGTTTCACAAGGATGGGCTAAGGTCAGGGAACAAGGCCAGCAGAAAGGTGAAACTAGCCCCGATTTGGATGATTTGCTCCGACTTGAGGAGCAAGCGAAGACACAAGGTTTGGGCAAATGGAGCAAGGCACCTGGTGCTTCCGAGGCTGCCATCAGAGACTTGCCTCTCTCTGCCATTGGTGGTGATGCTGCTAATTTTGATGCCTTTAGCTTTGTATCAGAAAACAAAGGCAAATCACTTCCTGCAATTGTAGAGCAGGTCCGTGATGGAAGCACTGTTCGAGTCTACTTGCTTCCTGACTTTCAGTTTGTCCAGGTTTTTGTCGCTGGAATCCAGTCTCCATCAATGGGAAGAAGGCCGGCTGCAGAACCTGTTGTTCAAGCTGAGCGATCTCCGGATCAGCCAAATGGAGCAGCAGCAGCTGCTGAACCTCGTGCTCCTCTGACCTCAGCACAGAGACTTGCTGCATCTGCTGCAACAGAAATGGAAGTAGCTCCAGAGCCCTTTGGAAGGGAAGCAAAGCACTTTACAGAGATGCGTGTTTTACATAAAGATGTTCGTATTATCCCTGAGGGTTCGGATAAGTTTAGCAACTTAATTTGTTCGGTCTATTACAATGATGGTAATGAAGCAAAAGGCCTGGCCATGCAGTTGCTAACCAATGGGTTGGCTAAATATGTTGAGTGGAGTGGAAAGAATTTGGAAGAAAAGGACAGAAGGGAGCTCAAATCCGCTGAGCTTGAGGCAAAGAAGAAAAGAATCAGGATGTGGACAAACTTTGTGCCTCCTGCCTCGGATTCAAAGGCAATTCATGACCAGAATTTTACTGGAAAGGTCGTGGAGGTTGTTAGCGGAGACTGTATTATTGTTGCTGATGATGCTGTGCCATTTGGTAGTCCATTAGCTGAGAGACGAGTCAATCTCTCGAGTATTAGGGCTCCCCTTATGCGCAGTAGAGACGAGAATAACAAGAATAAACCTGAGAAATATGCTCGTGAGGCAAAGGAGTTTCTTCGCCAAAAGCTCATTGGTCGTCAGGTGAATGTTTCCATGGAGTACTCAAGAAAGGTTGGTGGAGATGGTGTCCTACCAGGTGGTCCAGCGGATGCCAGGGTAATGGACTTTGGATCAGTGTTCCTGGTTTCTCCAACGAAGGGTGATGCAGACGATGTTGCACCTGTTCCATCTACGGCTGGCCAGCCAGCTGGATTCAATGTTGCCGAAATGCTGGTTGCTCGTGGCTTTGCTCGCGTTGTCAGACATCGCGATTTTGAAGAAAGGTCCAACTACTATGATGCTCTTCTCACAGCTGAAGCAAAAGCAATGGCTAATAAGAAAGGGCAATATTCAACGAGGGACCCACCAGTACAGCACATTCAGGACCTTACTACTGCATCAGCAAGGAAAGCAAAAGACTTTCTGCCATTTTTGCAAAGAAGTAGAAGGCTTCCTGCCATTGTGGAATATGTACTCAGTGGTCATCGGTTCAAGTTGGTAATTCCTAAAGAAACTTGTACCATTGCATTTTCGTTCTCTGGAGTAAGGTGTCCTGGACGAGGTGAACCCTATTCAGACGAGGCCCTTGCATTTATGAGGAGAAAAATTCTGCAGAGAGATGTGGAGATTGAAGTGGAAACTTGTGATAGAACTGGAACCTTCTTGGGATCTCTTTGGGAATCTAGAACAAACATGGCTGCAGTATTGCTAGAGGCTGGACTTGCAAAGTTCCAGGCTTCTTTCGGTGCTGACAGGATAGCTGATTCTCATCTTCTTGCTCAAGCTGAGGACAATGCTAAACGCCAGAAGTTGAAGATATGGGAAAATTATGTCGAGGGACAGGAGGTTCCAAATGGTACACCGGTTCCTGAAGCCCGACAAAAGGAAGTTCTTAAGGTGGTTGTTAGTGAAGTCCTCGGTGGTGGCAAGTTCTATGTTCAAACAGTTGGTGACCAGATGGTTGCTTCTATTCAGCAGCAGCTTTCTTCTCTGGAAATTGGAGAACCTCCTGTACTTGGCAGCTTTAACCCAAAGAAGGGTGATCTGGTCCTTGCTCAATTTAGTGCCGATAACTCATGGAACCGAGCTATGATTGTGAATGTCCCCCGTGGTGGTTCGGCTCAATCACAAAAGGACGAGTATGAGGTTTTTTATATCGATTATGGTAATCAAGAAGTAGTTCCTTACAGTCGCCTAAGACCTCTACCTCCGTCTGTTCACTCTGTACCTGGATTGGCTCAACTATGCAGCCTTGCATTCATCAAGATCCCTGGTGTAGAGGAGGATTATGGGCAAGAGGCTGCTGAGTATTTGAGTGAGCTAACTCTTAACAGTGCCCGAGAATTCAGGGCCATGATCGAGGACAAGGATACATCGGGAGGAAAAGCCAAAGGTCAAGGAACTGGAACAGTCCTGCTGGTTACCTTGGTCGATGTTGAAGCTGGCTCAAGCATTAATGCTGCCATGCTCAAGGTCGGACTTGCTAGATTAGAAAAGCGTAACAGGTGGGACCCAAAAGAGAGGAAGTCCGCCATCGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33812.p1 GENE.R_Transcript_33812~~R_Transcript_33812.p1 ORF type:3prime_partial len:953 (+),score=260.34,SNase|PF00565.13|1.6e-11,SNase|PF00565.13|1.3e-14,SNase|PF00565.13|0.033,SNase|PF00565.13|0.017,SNase|PF00565.13|2.5e-13,SNase|PF00565.13|0.017,TUDOR|PF00567.20|1.1e+03,TUDOR|PF00567.20|7.7e-21,Agenet|PF05641.8|1.9e+03,Agenet|PF05641.8|1.6e+04,Agenet|PF05641.8|1.6e+04,Agenet|PF05641.8|5.2e+02,Agenet|PF05641.8|0.00027 R_Transcript_33812:268-3123(+)
MATAPAAGKWLRGMVKAVPSGDSLVIMGIPKGDAIPPERTVTLSSLMAPRLARRGGYDEPFAWESREYLRKLCVGKEVTFRVDYTVSSIGREFATVFVGDKNVGMLVVSQGWAKVREQGQQKGETSPDLDDLLRLEEQAKTQGLGKWSKAPGASEAAIRDLPLSAIGGDAANFDAFSFVSENKGKSLPAIVEQVRDGSTVRVYLLPDFQFVQVFVAGIQSPSMGRRPAAEPVVQAERSPDQPNGAAAAAEPRAPLTSAQRLAASAATEMEVAPEPFGREAKHFTEMRVLHKDVRIIPEGSDKFSNLICSVYYNDGNEAKGLAMQLLTNGLAKYVEWSGKNLEEKDRRELKSAELEAKKKRIRMWTNFVPPASDSKAIHDQNFTGKVVEVVSGDCIIVADDAVPFGSPLAERRVNLSSIRAPLMRSRDENNKNKPEKYAREAKEFLRQKLIGRQVNVSMEYSRKVGGDGVLPGGPADARVMDFGSVFLVSPTKGDADDVAPVPSTAGQPAGFNVAEMLVARGFARVVRHRDFEERSNYYDALLTAEAKAMANKKGQYSTRDPPVQHIQDLTTASARKAKDFLPFLQRSRRLPAIVEYVLSGHRFKLVIPKETCTIAFSFSGVRCPGRGEPYSDEALAFMRRKILQRDVEIEVETCDRTGTFLGSLWESRTNMAAVLLEAGLAKFQASFGADRIADSHLLAQAEDNAKRQKLKIWENYVEGQEVPNGTPVPEARQKEVLKVVVSEVLGGGKFYVQTVGDQMVASIQQQLSSLEIGEPPVLGSFNPKKGDLVLAQFSADNSWNRAMIVNVPRGGSAQSQKDEYEVFYIDYGNQEVVPYSRLRPLPPSVHSVPGLAQLCSLAFIKIPGVEEDYGQEAAEYLSELTLNSAREFRAMIEDKDTSGGKAKGQGTGTVLLVTLVDVEAGSSINAAMLKVGLARLEKRNRWDPKERKSAID

Click here to download the sequence:
Link to NCBI Protein BLAST