Transcript Information: R_Transcript_338277.p1


Annotated TAIR IDATMG00820.1
Annotated Gene NameReverse transcriptase (RNA-dependent DNA polymerase)
Annotated Gene Symbol(s)ORF170
Annotation TypeHomolog
Chromosome PositionchrM:228573-229085 | Reverse length=170
E-Value2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.4674844407378
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.2233439253765


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_338277.p1 GENE.R_Transcript_338277~~R_Transcript_338277.p1 ORF type:5prime_partial len:98 (-),score=9.06,RVT_2|PF07727.10|2.4e-10 R_Transcript_338277:327-620(-)
TCAAACTCAAAGCAAGCGAACTCCACTACTACTCAACCCCAACCCACTGAACCCATTAATGTAGCTCAAGCTCTTCAAGACCCACTTTGGCGTCAAGCCATGTTGGATGAGCTTCGTTCTCTCTACACCCTTGGCATGTGGGATCCGGTGCCCCTCAATTCCGGTCATATTCTCACCAAGTGCAAGTGGGTGTTTTGTATCAAATATAAATATGATGGTACCATCGAACGTTATCGAGCACGACTTGTTGTCAAAGGATTTTCAACAAGGCCTAGAGTCCTACTTCTTCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_338277.p1 GENE.R_Transcript_338277~~R_Transcript_338277.p1 ORF type:5prime_partial len:98 (-),score=9.06,RVT_2|PF07727.10|2.4e-10 R_Transcript_338277:327-620(-)
SNSKQANSTTTQPQPTEPINVAQALQDPLWRQAMLDELRSLYTLGMWDPVPLNSGHILTKCKWVFCIKYKYDGTIERYRARLVVKGFSTRPRVLLLL*

Click here to download the sequence:
Link to NCBI Protein BLAST