Transcript Information: R_Transcript_338440.p2


Annotated TAIR IDAT1G64080.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52870.1); Has 1546 Blast hits to 738 proteins in 176 species: Archae - 0; Bacteria - 143; Metazoa - 278; Fungi - 131; Plants - 95; Viruses - 4; Other Eukaryotes - 895 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:23785230-23786557 | Reverse length=411
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.12854197855436
Replicate 20
Replicate 30.64526021397612
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.46241629620206


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_338440.p2 GENE.R_Transcript_338440~~R_Transcript_338440.p2 ORF type:internal len:142 (-),score=9.55 R_Transcript_338440:3-425(-)
TACGACACGGACTCTACTGGGCCCCAGGATGACGGCCCCTTCTTCGACTTAGAGTTCGCCGTGCCAGCTGACGAAGAGGAGAGAGAAACTGATATCACCGACGACGAAGAAGAAAACGACGTCGTAAAAGGTGGTGCATGTGACCGTTCTGACCCTAATTTGTTACCGTTGTCCCCAGCAGACGATGACGCGTTCTTCAAAGGCAGGATTGTCCGAATCGACGGCGAAGAGGAACATGAGGAAACCATTTCTAGTAATAATAACAACAATAAGTCCGGCCAGTTTCCGATCCCGGTGTCGCTTGTCCGGTCAGCTACCAAGTTGCGGGTCTTCATGCTCGGGTTAAAGCGGTCAAAGTCCGAGTCAACAACTACCACCACCATGACAACGACAGCAACAAAATCACCTAGCAAGCTGTTTACG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_338440.p2 GENE.R_Transcript_338440~~R_Transcript_338440.p2 ORF type:internal len:142 (-),score=9.55 R_Transcript_338440:3-425(-)
YDTDSTGPQDDGPFFDLEFAVPADEEERETDITDDEEENDVVKGGACDRSDPNLLPLSPADDDAFFKGRIVRIDGEEEHEETISSNNNNNKSGQFPIPVSLVRSATKLRVFMLGLKRSKSESTTTTTMTTTATKSPSKLFT

Click here to download the sequence:
Link to NCBI Protein BLAST