Transcript Information: R_Transcript_338580.p1


Annotated TAIR IDAT3G42170.1
Annotated Gene NameBED zinc finger ;hAT family dimerisation domain
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:14321838-14323928 | Forward length=696
E-Value1E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3025785384997
Replicate 22.1649881752214
Replicate 33.4315540756882
Condition 2: 8 Hour
Replicate 13.5252023464906
Replicate 24.0893441499445
Replicate 35.7915644781001
Condition 3: 24 Hour
Replicate 14.689824433675
Replicate 23.6901795030927
Replicate 34.2583083048438


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_338580.p1 GENE.R_Transcript_338580~~R_Transcript_338580.p1 ORF type:complete len:514 (-),score=83.81,DUF4413|PF14372.2|1e-28 R_Transcript_338580:825-2366(-)
ATGCATATGTTAATTTATCTAGGAGTTTCATCTTCCCCATCTACACCAATCCCTCTTGATGATGACCATGATTCAAATATCTCATCATTGAAAACTCCTGGTAGAAATTGGAACTCTCCAGTTTGGGACAACTATGGAATATTTTCTGGGGACATATTTCCGGATGGCATCCCACGTGCTATATGTAAGTTCTGTAAAGAAGGACCAAAAATTGCTAATTCATCCAATGGTACATCTAATTTTAAGCGTCACACTGATAGATGCCATGCTCGTTCTTCTCGTGATGTTGGTCAAATGCTTATAAACAATGATGGAAAATTGTCTAAAAAAATGGATCCTAAGATGTATAAAGAATTGGTGGCACTTGCTATTATAAGACATGGATATACTTTCACTTTTGCCGAGCATGAGGGAAATAGAAATATTCATGTTTATTTGAATGGGAATTACAAGCCTATATCTAGGAATACGGCCAAAAATCATTGTATGAAAATCCACAATAGGGAAGAGAAGAAACTTAGAGAGCAATTAGGAAAACTCCCTGGAAGAATTTGTTTGACTAGTGACATGTGGACTTCCATTGTGGATCAAGGTTATCTTTCCATTACCGCTCATTACATTGATGCTAATTGGAAATTGCATGGAAAAGTGTTGAATTTTTGTCATTTGGAACCTCCTCATAATGCCTCTAATGTCCATAGTAAAATCTTTTCTCTGTTGAAAGACTGGGGAGTTCATAAAAAGGTATTTTCCATCACATTGGATAATGCTAAGTACAATGACAACATGCAAGATCAATTAGCTCTTTCTCTTTCTGTGCATTCGCCCTTGCTTTCTAACGGTGACTTCTTTCATATTAGATGTTGTGCGCATATTTTGAACTTAATTGTTCATGAAGGGTTGAAGGTAGTTAATGAGGAAATGCGCAAGATCAAAAAGGTGGTGAATTATGTTACCGGTTCTGAGGCTAGGAAGTTGAGGTTTTATGAACATGCTTTGGCTGCTGATATTGATTGTTCTAGGGGGTTGTCTTTAGATTGCCCTACTAGGTGGAATTCGACTTACAAAATGCTTGTAAAGGCAAGGGTTTATCGTGTTGTGTTCTTAAATATGAGTAGGCTTGAAACCGAATTTCCTCCCCCTCCCACGGATGAGGAATGGAAAAGAATTGATAGGATAATTGCACTTCTGAAACCTTTTGACAAGCTCACTACTTATATGTCGGGGAGGAAGTACCCAACTTCAAATTTATACTTAAAATGTGTGTGGACTATTCAATCTTTGCTTCTCCAATATTCTAAGTGTGATGATAGTACTTTGAAGACAATGGCAAATTACATGAAGGTGAAATTTGACAAGTATTGGGGTTCTTATAGCATTATCCTCTCTTTTGCTGGGATTTTAGATCCTCGTTTCAAAATACAATTCATTGATTATTGTTTTAGAGAATTAGATGAGGATAATGCAGAAATTAATGTTAGAATTGTGAAAGAGAAGTTGTTTAAGTTGTTTGGTGAGTACAAAAGGGGGGCCTTGAAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_338580.p1 GENE.R_Transcript_338580~~R_Transcript_338580.p1 ORF type:complete len:514 (-),score=83.81,DUF4413|PF14372.2|1e-28 R_Transcript_338580:825-2366(-)
MHMLIYLGVSSSPSTPIPLDDDHDSNISSLKTPGRNWNSPVWDNYGIFSGDIFPDGIPRAICKFCKEGPKIANSSNGTSNFKRHTDRCHARSSRDVGQMLINNDGKLSKKMDPKMYKELVALAIIRHGYTFTFAEHEGNRNIHVYLNGNYKPISRNTAKNHCMKIHNREEKKLREQLGKLPGRICLTSDMWTSIVDQGYLSITAHYIDANWKLHGKVLNFCHLEPPHNASNVHSKIFSLLKDWGVHKKVFSITLDNAKYNDNMQDQLALSLSVHSPLLSNGDFFHIRCCAHILNLIVHEGLKVVNEEMRKIKKVVNYVTGSEARKLRFYEHALAADIDCSRGLSLDCPTRWNSTYKMLVKARVYRVVFLNMSRLETEFPPPPTDEEWKRIDRIIALLKPFDKLTTYMSGRKYPTSNLYLKCVWTIQSLLLQYSKCDDSTLKTMANYMKVKFDKYWGSYSIILSFAGILDPRFKIQFIDYCFRELDEDNAEINVRIVKEKLFKLFGEYKRGALK*

Click here to download the sequence:
Link to NCBI Protein BLAST