Transcript Information: R_Transcript_33879.p1


Annotated TAIR IDAT5G12080.1
Annotated Gene Namemechanosensitive channel of small conductance-like 10
Annotated Gene Symbol(s)MSL10, ATMSL10
Annotation TypeHomolog
Chromosome Positionchr5:3898182-3900923 | Reverse length=734
E-Value4E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.9723493996512
Replicate 24.6089439938215
Replicate 37.0955016456375
Condition 2: 8 Hour
Replicate 16.7784040768593
Replicate 28.7261977916822
Replicate 311.023783035308
Condition 3: 24 Hour
Replicate 15.4034838962767
Replicate 24.6531216927681
Replicate 37.2603117985806


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_33879.p1 GENE.R_Transcript_33879~~R_Transcript_33879.p1 ORF type:complete len:820 (+),score=97.53,MS_channel|PF00924.14|5.9e-08 R_Transcript_33879:300-2759(+)
ATGGAGGATGAGGTCCAGCTAGACAGGCCCTTCATCGTCAGGGTCGAGGAAGAGGAGGAGAAGGAGAAGGGCCCGAATGGCAGCACTTCCAGCACTACTCTTGCTGAAAATCCTGCAGACAAAATTACTACAGACACTGATACTAATAATAACAGTAGTATTAGTCGTAGGTTTGTAATTCCTAAATGGATAAGAAAAGGTGTTACCAATGTGATGAAAATTGTGGGGGTTGTCCTGTTTTTCTGTCTCCTCATCACAGGTACTGTCGCAACGGCCTTGATTTGTCGGGTGATCAACATAATCATACACATAATCAACTCAACAAAGGGTGATGGAGGCGGAAGGAAAGTGGTCAGTCCAATCTCAAATGGGGCTTCTACTTCAATCCTGCTGCTCGTGATGATCTTATTAGGTGCACTCCTAAATGTTCCTGAGTGGCAGCATAACACCCTTTGTGGACTGCAAATTGTCAAATGGATTCAAGTTTTCATCATAATTCTGGGCTACTTGTGTATTGGGACGAGCACTGAGTTTACGATATCCAGTTGCAAAGAGTCCAATGATGTAGAGTTTGTCGAAGATCCCTGGTTTTGGTGGCTGCTCGAGGTGATCAACTTCGCCCTTCTGTTGCCTGTGGGGGCATTAATTATGAAGGTGACTCCCACCTGGAGACATGGTAGGAAGTGGATCTACGCAGTGATTCTTGTCATCCTTGCCCAGAATGTCATCAGCCTAGCGGGTCACTTAATGGTGAGATATTTTAAGAAGGCCTTGTGCTCGCGAGCTGCTGGCAAAAGATGTAAGGGCGCAAACTGCGGCTTTTATCTAATGCAAGGTCTGAGAAGAAGCATTACCTTCATAGTTGTGGCGTTGTTGCATCTCCTTGTTTGGATTTTCTATTTATGCCCTACCTTAACATTGGCTGGCAAAGTTGTGGATTTTGGTACTTGGATTTTTCTTTGCGAGCTTCTGTTTGGAGCGCTCTGGATAATCAAGGATTTCATACTAATTTTGTGGAAGGCTCACGCACTTTATGACAAAAGACTAATGAGAAAACTGTCTCAGTGGTATTGCCTCGATTCTCTTGGTCTTATCTCGTTGAGGAACAGGAATGGGACTCTACATGCTGATCAACCATCTGCATCTTCAGATAATAATGTATCGTCAGCATTGGATTTTGTTTTCGAGTTCTTTCCATTTACTCTTACCATATTTGTCAATCCTCTAGAGGTGCACAAAAACACAAAATGGAACAGAACAATCAAGGAGTGGAGAGAAGCCAAAGGAAAATTAGTCCAACTTGTACTCCAAGCACAAGGGGCTGATGGTCCTGTTTTGTCAATACATGATAAGGAAACAGTTGCTCAGGCTTTTCTACCTCCAGGCTGTACATCATTGCCAAATGATAATGATATATCAGAATTTTGCGAAAAATGGAGGTATATATATGGGTTCCATGAAGATGATACTGATAGCACTATGAGCAAGACTAGCAAGGAAGTGCTCGAGGATCATTCTATTAGAAACGAGGCAGAGTTAGAGGAAACCATTAGTCCATTGTGCAAAATAGAGGATGATTCAGTAGACAAGATTCTGTATAAGCAATTTGCCAAGATTCTGTATAAGCAACTTGAGGAGACTAACCAGACAAAACGCGGAGTTGATGCCAAAGATTTCCGACCATGGATGGAAAGAGCATACCAAAATTGTTTGCAATTGCACGGTTTCCTAGCTGGTGGTCGAGATGTTGTGAATTTCTTGAACTGGCTGATGCTTGGGTTCATAATTACGTTAGTCGTTATCATTTGGCTACACCTCAACCAAATCTTAACAACCAAAGTAACTGTGGCCCTTACATCCCCAATATTACCTCTGACTTTTATTTTTGGAGACACTCTCAAAACTATGTTTCAAGGATTCTTATTCGCCTACATCACTCATCCTTTTGCTATTGGTGATGTTTGTGTGATCAATCGGACTCAGTTAAAGGTCAAAGATATTGGCATTTGGAGGACAACATTCTCAAAGCTTGGTACAGAAGATCATGAAGTTGTGTACCCAAATGCTGCTCTAACCAATAGTGCCATTATAAGTTACGAGGGCGGCACAATTAATCTGAATGATTCTGTGGAGTTCACTTTACATCCTGCTATGGACATACAATCCTTAGAAGGCTCCATTAGAAGATATTTTTTAACAGGTTCGGTGGAGGAGGATACTCAACAAGGTGCACACAGTCAACCGGGCTCAGAGAACAATACTCATGATAATGTAGAAGTCGATGTGGTTGTACAACAGATTCCAGACAATATCAAGATGACAGTCCACTTCAAGCATGACAATATCATTCTTGATATGACAAGCAAACAAGCTTCAATCAGTAAAATCAAAAGAAAATCAGAAATTCTTGAGAATTTACTTGAGCTTGTATTAAAATTAGAGCAAACTCTCATAGTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_33879.p1 GENE.R_Transcript_33879~~R_Transcript_33879.p1 ORF type:complete len:820 (+),score=97.53,MS_channel|PF00924.14|5.9e-08 R_Transcript_33879:300-2759(+)
MEDEVQLDRPFIVRVEEEEEKEKGPNGSTSSTTLAENPADKITTDTDTNNNSSISRRFVIPKWIRKGVTNVMKIVGVVLFFCLLITGTVATALICRVINIIIHIINSTKGDGGGRKVVSPISNGASTSILLLVMILLGALLNVPEWQHNTLCGLQIVKWIQVFIIILGYLCIGTSTEFTISSCKESNDVEFVEDPWFWWLLEVINFALLLPVGALIMKVTPTWRHGRKWIYAVILVILAQNVISLAGHLMVRYFKKALCSRAAGKRCKGANCGFYLMQGLRRSITFIVVALLHLLVWIFYLCPTLTLAGKVVDFGTWIFLCELLFGALWIIKDFILILWKAHALYDKRLMRKLSQWYCLDSLGLISLRNRNGTLHADQPSASSDNNVSSALDFVFEFFPFTLTIFVNPLEVHKNTKWNRTIKEWREAKGKLVQLVLQAQGADGPVLSIHDKETVAQAFLPPGCTSLPNDNDISEFCEKWRYIYGFHEDDTDSTMSKTSKEVLEDHSIRNEAELEETISPLCKIEDDSVDKILYKQFAKILYKQLEETNQTKRGVDAKDFRPWMERAYQNCLQLHGFLAGGRDVVNFLNWLMLGFIITLVVIIWLHLNQILTTKVTVALTSPILPLTFIFGDTLKTMFQGFLFAYITHPFAIGDVCVINRTQLKVKDIGIWRTTFSKLGTEDHEVVYPNAALTNSAIISYEGGTINLNDSVEFTLHPAMDIQSLEGSIRRYFLTGSVEEDTQQGAHSQPGSENNTHDNVEVDVVVQQIPDNIKMTVHFKHDNIILDMTSKQASISKIKRKSEILENLLELVLKLEQTLIV*

Click here to download the sequence:
Link to NCBI Protein BLAST