Transcript Information: R_Transcript_339030.p2


Annotated TAIR IDAT5G44710.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Ribosomal protein S27/S33, mitochondrial (InterPro:IPR013219); Has 101 Blast hits to 101 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 59; Plants - 26; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:18041621-18042322 | Forward length=102
E-Value2.2E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1113.99803796265
Replicate 2116.62490503962
Replicate 3109.95234046153
Condition 2: 8 Hour
Replicate 1103.95362663967
Replicate 2114.04049739005
Replicate 399.503829128121
Condition 3: 24 Hour
Replicate 1119.17189024563
Replicate 2117.49437918071
Replicate 3108.24464863338


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_339030.p2 GENE.R_Transcript_339030~~R_Transcript_339030.p2 ORF type:5prime_partial len:110 (-),score=26.56,MRP-S33|PF08293.7|1.4e-14 R_Transcript_339030:96-425(-)
GGGGAGCCGAAAAGAGAGATGAATGCGGTGGCAGGAGGTCTAAGGAGTGCCATAGGAGAAGCTGTGGTGAGAGGAGTGACAGAGGCGAGAGCTCGCATATTCGGTCATGTATTGAATCCAACAGCCCAAAGATCTGCTCACAAAGTTCTGAGAAAGAAGCTCATTGGTGACAAAGTTGCTCAGTGGTATCCTTATGACCTTAAACACGATGATCCTCTTATCATGGCGCAACTTGAACAAGAACGCTTGAATAAGCTTGAGATGTTGAATCGTCGTGGAAAGGGACCTCCAAAGAAGGGACAGGGAAAGCGTGCTTCTAAACGCAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_339030.p2 GENE.R_Transcript_339030~~R_Transcript_339030.p2 ORF type:5prime_partial len:110 (-),score=26.56,MRP-S33|PF08293.7|1.4e-14 R_Transcript_339030:96-425(-)
GEPKREMNAVAGGLRSAIGEAVVRGVTEARARIFGHVLNPTAQRSAHKVLRKKLIGDKVAQWYPYDLKHDDPLIMAQLEQERLNKLEMLNRRGKGPPKKGQGKRASKRK*

Click here to download the sequence:
Link to NCBI Protein BLAST