Transcript Information: R_Transcript_339059.p1


Annotated TAIR IDAT4G35800.1
Annotated Gene NameRNA polymerase II large subunit
Annotated Gene Symbol(s)NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS, RNA_POL_I
Annotation TypeOrtholog
Chromosome Positionchr4:16961115-16967892 | Reverse length=1839
E-Value1.1E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22396271110084
Replicate 20.38643497698708
Replicate 30.28106426498346
Condition 2: 8 Hour
Replicate 10.1502200303512
Replicate 20
Replicate 30.1113595743582
Condition 3: 24 Hour
Replicate 10.42253632934425
Replicate 20.13530833675201
Replicate 30.13428039685213


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_339059.p1 GENE.R_Transcript_339059~~R_Transcript_339059.p1 ORF type:internal len:163 (+),score=5.22,RNA_pol_Rpb1_R|PF05001.9|0.08,RNA_pol_Rpb1_R|PF05001.9|0.019,RNA_pol_Rpb1_R|PF05001.9|0.021,RNA_pol_Rpb1_R|PF05001.9|0.025,RNA_pol_Rpb1_R|PF05001.9|0.027,RNA_pol_Rpb1_R|PF05001.9|0.03,RNA_pol_Rpb1_R|PF05001.9|0.028,RNA_pol_Rpb1_R|PF05001.9|0.31,RNA_pol_Rpb1_R|PF05001.9|1.1,RNA_pol_Rpb1_R|PF05001.9|0.028,RNA_pol_Rpb1_R|PF05001.9|0.029,RNA_pol_Rpb1_R|PF05001.9|0.027,RNA_pol_Rpb1_R|PF05001.9|0.028,RNA_pol_Rpb1_R|PF05001.9|0.31,RNA_pol_Rpb1_R|PF05001.9|11 R_Transcript_339059:1-486(+)
TCACCAACTTCGCCATCATACTCTCCAACTTCACCTTCATATTCTCCAACCTCTCCATCTTATTCACCCACCTCACCTTCATACTCACCAACGTCGCCATCATACTCACCAACGTCGCCCTCTTACTCTCCAACATCACCGTCATACTCTCCAACTTCTCCTTCATACTCTCCAACGTCACCATCGTATTCTCCTACTTCGCCATCATACTCGCCAACATCACCTTCATACTCCCCAACATCACCTTCATATTCACCCTCATCGCCATCATACTCTCCCACTTCACCTTCATATTCTCCAACTTCACCATCTTATTCACCAACTTCGCCATCTTATTCACCCACCTCACCGTCGTATTCACCAACTTCGCCATCATACTCACCAACCTCACCTTCTTATTCTCCATCATCGCCATCATACTCTCCAACCTCGCCTTCATACTCGCCAACTTCACCTTCCTATTCTCCGAATTACAATTATTCTCCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_339059.p1 GENE.R_Transcript_339059~~R_Transcript_339059.p1 ORF type:internal len:163 (+),score=5.22,RNA_pol_Rpb1_R|PF05001.9|0.08,RNA_pol_Rpb1_R|PF05001.9|0.019,RNA_pol_Rpb1_R|PF05001.9|0.021,RNA_pol_Rpb1_R|PF05001.9|0.025,RNA_pol_Rpb1_R|PF05001.9|0.027,RNA_pol_Rpb1_R|PF05001.9|0.03,RNA_pol_Rpb1_R|PF05001.9|0.028,RNA_pol_Rpb1_R|PF05001.9|0.31,RNA_pol_Rpb1_R|PF05001.9|1.1,RNA_pol_Rpb1_R|PF05001.9|0.028,RNA_pol_Rpb1_R|PF05001.9|0.029,RNA_pol_Rpb1_R|PF05001.9|0.027,RNA_pol_Rpb1_R|PF05001.9|0.028,RNA_pol_Rpb1_R|PF05001.9|0.31,RNA_pol_Rpb1_R|PF05001.9|11 R_Transcript_339059:1-486(+)
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPNYNYSP

Click here to download the sequence:
Link to NCBI Protein BLAST