Transcript Information: R_Transcript_339610.p1


Annotated TAIR IDAT5G23130.1
Annotated Gene NamePeptidoglycan-binding LysM domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:7781475-7783333 | Forward length=397
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5701471789005
Replicate 20.90306668457196
Replicate 30.73892701923072
Condition 2: 8 Hour
Replicate 11.0531554816019
Replicate 21.2021979484508
Replicate 31.1710716529282
Condition 3: 24 Hour
Replicate 11.8514360667503
Replicate 21.0671899463183
Replicate 30.70605498989991


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_339610.p1 GENE.R_Transcript_339610~~R_Transcript_339610.p1 ORF type:complete len:186 (-),score=30.38 R_Transcript_339610:68-625(-)
ATGAGCTCTTTGCAAGGGTACTATGGGCTTAAGGGCAGAAGAAACTCTTCTGAAGGCTGCGAAATGGCGGTTTACTGCAAAGGAAGTAACAACTCCCATGAAGATGACGCATATACGACACCATCATTGCTGATGAATCCCCCTCTCAGTCATCATAGGAGATCCAGAAGTTTGGCTAATGGTTTCAAGACTGAAGAATGCGATCCAACTGATGATGCGGACACAGATCTTGATAAACGGTTGGGTAAACAAAGCAGGCGGCGCCAAAAATCAGAAGTGGACTTTGGTCGCACTCCCGAGAAATTGTTGAAAGAGGAAAACGGTAGCAGTAGTTGGTTTTCGGTGGACTCTGCTGCGGCTGATAACTCATCAGGATTTAGAAAGTCATCAAGCACATCAAGTTTACAGGAACAGGAAAACGGTAGTAGTTCATTCATCTGGTCAGCATCCAAGTGGTCTTCTTTGAAGCCAGACTTACAGGCCGCCCTTGCAAAACCAATCTTTGATGGCCTTCCGAAACCAATTACTGGTCGAAAAACTAAAGCCGCTCTGGACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_339610.p1 GENE.R_Transcript_339610~~R_Transcript_339610.p1 ORF type:complete len:186 (-),score=30.38 R_Transcript_339610:68-625(-)
MSSLQGYYGLKGRRNSSEGCEMAVYCKGSNNSHEDDAYTTPSLLMNPPLSHHRRSRSLANGFKTEECDPTDDADTDLDKRLGKQSRRRQKSEVDFGRTPEKLLKEENGSSSWFSVDSAAADNSSGFRKSSSTSSLQEQENGSSSFIWSASKWSSLKPDLQAALAKPIFDGLPKPITGRKTKAALD*

Click here to download the sequence:
Link to NCBI Protein BLAST