Transcript Information: R_Transcript_339707.p1


Annotated TAIR IDAT5G64510.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
Annotated Gene Symbol(s)TIN1
Annotation TypeHomolog
Chromosome Positionchr5:25784592-25786152 | Forward length=424
E-Value4E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8605386570828
Replicate 20.47006642723055
Replicate 32.9060786502581
Condition 2: 8 Hour
Replicate 11.2791123479904
Replicate 21.001233515277
Replicate 32.8446553957323
Condition 3: 24 Hour
Replicate 11.5419422764876
Replicate 22.1396892953545
Replicate 32.9401394355534


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_339707.p1 GENE.R_Transcript_339707~~R_Transcript_339707.p1 ORF type:3prime_partial len:134 (-),score=43.78 R_Transcript_339707:3-401(-)
ATGGCTTCCCAAAATTTCAGAGCTTTGATAGCGGTTCTTGTTATATCTATGGTGGTGGTGACATCATCAGCTCTTGTTTCATCTCCTGATGTTAATCCTCCTTTTCCTAAATTCCTTTCTGATGTGAAGGAAGCAATAGTGAAAGGATTAGGGTTTCAGGCGGATGATTTTACGATATCAGGGTTTGATTGGAGGGATGCATTGGTGGGGCAGTCAGTGGCATATGAATTTGATGTGGAAATTGATAATAAGGTTCTTCCAGTGAAGCTCCTTGAGGATGTGAGTAGATGGGAGTATGTGGATTTGCCTATATTTCGTTTTGAAGAACCTGTTAAGCCAGGGGACAAAAATGGTTTGATTGAGAGGAAGAAATTGCAGAAGAATGCAGGTCCTGTTTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_339707.p1 GENE.R_Transcript_339707~~R_Transcript_339707.p1 ORF type:3prime_partial len:134 (-),score=43.78 R_Transcript_339707:3-401(-)
MASQNFRALIAVLVISMVVVTSSALVSSPDVNPPFPKFLSDVKEAIVKGLGFQADDFTISGFDWRDALVGQSVAYEFDVEIDNKVLPVKLLEDVSRWEYVDLPIFRFEEPVKPGDKNGLIERKKLQKNAGPVL

Click here to download the sequence:
Link to NCBI Protein BLAST