Transcript Information: R_Transcript_339827.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value7E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.33037033402206
Replicate 20
Replicate 30.10365039636268
Condition 2: 8 Hour
Replicate 10.5539788449603
Replicate 20.20236092163969
Replicate 30.65707187766107
Condition 3: 24 Hour
Replicate 11.1426962873518
Replicate 20
Replicate 30.099039387723517


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_339827.p1 GENE.R_Transcript_339827~~R_Transcript_339827.p1 ORF type:3prime_partial len:221 (+),score=5.82,LRR_8|PF13855.2|2.1e+03,LRR_8|PF13855.2|2.7e+02,LRR_8|PF13855.2|1e-07,LRR_8|PF13855.2|6.9e+02,LRR_4|PF12799.3|5.9,LRR_4|PF12799.3|0.016,LRR_4|PF12799.3|7.3e-05,LRR_4|PF12799.3|0.16 R_Transcript_339827:1-660(+)
ATGGATCATAGCAATAATGCCAGAGTTTTCCACCCCTTCAAATCCCTGCTCTTTCTGTTTCTCTTCTCCCTCATCACTCCCTCGAGTCATTGTACCGAGCCTTGCAATCACATCGACAAGGGCACCCTGCTTCAAATCAAAACCAAGTTGGGCAATCCTAGATCACTGTCAACATGGTTACCTAGCACAGATTGCTGCAAGGATTGGTGGGGTGGGTATCCGTATACATCGACTGAACTTGTGTGCAATGATCAGGGTCGAGTTACTTCCCTGTCTATTGAAGATGCAAGCGATATCTCCTATGAAATACTACCGGATTTCGGTGACCTTCCCTTCCTTCGGTCACTTAAGCTCACCTACGGAAACTTCTTAGGTCCCATTTTACCATCCATTTGCACTAAGTTCATCAACATAAGGTCTCTCACCATCGCCAATTTCAATGTCAGAGGCTCAATCCCGGATTGTCTAGGCCAGCTCCAAAATTTGAAAGAACTCAGTCTTTACTCCAATAGCCTTAGTGGCCGAATTCCGGAGTCCCTAAGCCAACTTTCCAACCTCGAGACCTTGGACCTGAGGCAAAATAACCTCTGGGGTACAATACCAAACTTATCTAACTCAACTCGATTGACACTGCTCAATGTTGCGGAAAATAACTTATCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_339827.p1 GENE.R_Transcript_339827~~R_Transcript_339827.p1 ORF type:3prime_partial len:221 (+),score=5.82,LRR_8|PF13855.2|2.1e+03,LRR_8|PF13855.2|2.7e+02,LRR_8|PF13855.2|1e-07,LRR_8|PF13855.2|6.9e+02,LRR_4|PF12799.3|5.9,LRR_4|PF12799.3|0.016,LRR_4|PF12799.3|7.3e-05,LRR_4|PF12799.3|0.16 R_Transcript_339827:1-660(+)
MDHSNNARVFHPFKSLLFLFLFSLITPSSHCTEPCNHIDKGTLLQIKTKLGNPRSLSTWLPSTDCCKDWWGGYPYTSTELVCNDQGRVTSLSIEDASDISYEILPDFGDLPFLRSLKLTYGNFLGPILPSICTKFINIRSLTIANFNVRGSIPDCLGQLQNLKELSLYSNSLSGRIPESLSQLSNLETLDLRQNNLWGTIPNLSNSTRLTLLNVAENNLS

Click here to download the sequence:
Link to NCBI Protein BLAST