Transcript Information: R_Transcript_339832.p1


Annotated TAIR IDAT5G06870.1
Annotated Gene Namepolygalacturonase inhibiting protein 2
Annotated Gene Symbol(s)PGIP2, ATPGIP2
Annotation TypeHomolog
Chromosome Positionchr5:2133941-2135016 | Forward length=330
E-Value3E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.37634971040657
Replicate 20.43291341064532
Replicate 30.11807596699048
Condition 2: 8 Hour
Replicate 10.12621579869714
Replicate 20
Replicate 30.18713000639574
Condition 3: 24 Hour
Replicate 10.11833921251394
Replicate 20.11368690149782
Replicate 30.22564644007111


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_339832.p1 GENE.R_Transcript_339832~~R_Transcript_339832.p1 ORF type:3prime_partial len:194 (+),score=5.52,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.47,LRR_4|PF12799.3|0.055,LRR_4|PF12799.3|0.0027,LRR_8|PF13855.2|1.8e+03,LRR_8|PF13855.2|1e+02,LRR_8|PF13855.2|6.3e-07 R_Transcript_339832:1-579(+)
ATGGATCATAGCAATAATGCCAGAGTTTTCCACCCCTTCAAATCCCTGCTCTTTCTGTTTCTCTTCTCCCTCATCACTCCCTCGAGTCATTGTACCGAGCCTTGCAATCACATCGACAAAGGCACCCTGCTTCAAATTAAAAACAAGCTGGGCAATCCTGAATCATTGTCGTCATGGTCAGCTAGCACAGATTGCTGCAAGGATTGGTGGGGTGGCTATCCGTACTCATTGACTGAACTTGAGTGCAACGACCAGGGTCGAGTTACTTCCCTGTCTATCGAAGAAGCTCTCGATATCCCCTACAAGATACTACCGGATTTTGGTGACCTTCCCTTCCTTCGGACACTTAAGCTCACCTATTGTAACTTCTCGGGGCCCATCGTACCATCCATTTGCACCAAGTTCATCAAAATCACGTCTCTAACCATCGCAAATTTCAACGTCACTGGCTCAATCCCGGATTGTGTAGGCCAACTCCAAAATTTAAAAGAGCTCAGTCTTTACTCCAATAGCCTTGGTGGCCAAATTCCCGAGTCTCTAAGCAAACTATCCAACCTCGAGACCTTAGACCTGAGCCAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_339832.p1 GENE.R_Transcript_339832~~R_Transcript_339832.p1 ORF type:3prime_partial len:194 (+),score=5.52,LRR_4|PF12799.3|1.6e+04,LRR_4|PF12799.3|0.47,LRR_4|PF12799.3|0.055,LRR_4|PF12799.3|0.0027,LRR_8|PF13855.2|1.8e+03,LRR_8|PF13855.2|1e+02,LRR_8|PF13855.2|6.3e-07 R_Transcript_339832:1-579(+)
MDHSNNARVFHPFKSLLFLFLFSLITPSSHCTEPCNHIDKGTLLQIKNKLGNPESLSSWSASTDCCKDWWGGYPYSLTELECNDQGRVTSLSIEEALDIPYKILPDFGDLPFLRTLKLTYCNFSGPIVPSICTKFIKITSLTIANFNVTGSIPDCVGQLQNLKELSLYSNSLGGQIPESLSKLSNLETLDLSQ

Click here to download the sequence:
Link to NCBI Protein BLAST