Transcript Information: R_Transcript_340128.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.61183109345426
Replicate 20.11729776768882
Replicate 30
Condition 2: 8 Hour
Replicate 10.27358508320944
Replicate 20.37476338281317
Replicate 30.70983952146765
Condition 3: 24 Hour
Replicate 10.25651181260005
Replicate 20.24642747363774
Replicate 30.97822143852055


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_340128.p1 GENE.R_Transcript_340128~~R_Transcript_340128.p1 ORF type:5prime_partial len:179 (+),score=33.24 R_Transcript_340128:1-537(+)
CCTGGCCACAAGAAATCTGAATTTCGAAGTTACAAGAGAGATCAAAAGAATGGATTTGTAAAACCCGACAAAAATGACAGTCCTAAGAAGAAAGAAGATAAGAGCACAACAACCGTGGCAACAAATGATCTAGATGATGTATTTCTCATTGGTGAAGACAATTATCTCAATGCCGACGATGATTGCTCATGGATTGTTGATTCAAGTGCCTCCTTTCACGTCACCCCACATCAAGAATTTTTCTCATCATACCAGGTTGGTGATTTTGGTACCGTGAAGATGGAAAATCAAGTTTCAGGCAAGATCGAGGGGATAGGTAATGTCAATCTTGTAACAATCACAGGATGTGAACTATTGTTGATGGATATGAGACATGTTCCAGACATGTGTCTCAATCTCATCTCAGTTGGGAAGCTAGATGAGGCTAGGTATATGAATAACTTCGGTGCAGAAAAATGGAAACTCACAAGAAGTAGCATTATTGTGGCTCGAGGAAGAAAAGAAAGCTCGTTGTATGTTATACAAGCCAAGCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_340128.p1 GENE.R_Transcript_340128~~R_Transcript_340128.p1 ORF type:5prime_partial len:179 (+),score=33.24 R_Transcript_340128:1-537(+)
PGHKKSEFRSYKRDQKNGFVKPDKNDSPKKKEDKSTTTVATNDLDDVFLIGEDNYLNADDDCSWIVDSSASFHVTPHQEFFSSYQVGDFGTVKMENQVSGKIEGIGNVNLVTITGCELLLMDMRHVPDMCLNLISVGKLDEARYMNNFGAEKWKLTRSSIIVARGRKESSLYVIQAKL*

Click here to download the sequence:
Link to NCBI Protein BLAST