Transcript Information: R_Transcript_340448.p1


Annotated TAIR IDAT5G59030.1
Annotated Gene Namecopper transporter 1
Annotated Gene Symbol(s)COPT1
Annotation TypeOrtholog
Chromosome Positionchr5:23833945-23834457 | Reverse length=170
E-Value2.3E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.62941244671444
Replicate 20.62058030787088
Replicate 30.56420535951114
Condition 2: 8 Hour
Replicate 11.085580219336
Replicate 21.2116734002613
Replicate 31.5200856184561
Condition 3: 24 Hour
Replicate 11.4702044037446
Replicate 21.0864659552008
Replicate 31.2938544642501


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_340448.p1 GENE.R_Transcript_340448~~R_Transcript_340448.p1 ORF type:5prime_partial len:203 (-),score=0.66,Ctr|PF04145.11|9.2e-22 R_Transcript_340448:90-698(-)
CTTCTTTTTTTTTTTGAAAAAAAGAGATATTTATACAAGCTCGTAAATCCTCAATCATCTGTAACCACACACACACACAACATAGAGATAGAGATGGAGCATGGTCATGAAAATGGGATGGGAGGGATGAACATGAGCATGGCCCCACCCCCATCATCATCACCATCATCATCCATGAACATGACCATGGCACCTCGGCATCACATGATGATGCACATGACCTTCTACTGGGGCAAAAACGCCGAGATTCTCTTCTCGGGCTGGCCCGGCACCCGGCCCGGAGGTGGCATGTACGCTCTCTCTCTCCTCGTCGTCTTTCTACTCGCCGTCATCATCGAGTTGCTCTCACGCTCCCGTCTCATCAAACCCACCGCCAACCACGTCGTTTCGGGGCTTATCCGTACCTTCCTCCACGCCCTGAGGATGGGCCTCGCCTATCTCGTTATGCTGGCGGTTATGTCCTTCAACGGCGGCGTTTTCATCGTTGCTATTGCGGGCCACGCAGTCGGATTCTTAATTTTTGGTACCCGGGTTTTCGGGCTCGGCCCGAAGGACTCCCATCTTCACCCTTATGAGAAGGCTTCGGATCTCCCTCCTATGAGTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_340448.p1 GENE.R_Transcript_340448~~R_Transcript_340448.p1 ORF type:5prime_partial len:203 (-),score=0.66,Ctr|PF04145.11|9.2e-22 R_Transcript_340448:90-698(-)
LLFFFEKKRYLYKLVNPQSSVTTHTHNIEIEMEHGHENGMGGMNMSMAPPPSSSPSSSMNMTMAPRHHMMMHMTFYWGKNAEILFSGWPGTRPGGGMYALSLLVVFLLAVIIELLSRSRLIKPTANHVVSGLIRTFLHALRMGLAYLVMLAVMSFNGGVFIVAIAGHAVGFLIFGTRVFGLGPKDSHLHPYEKASDLPPMSC*

Click here to download the sequence:
Link to NCBI Protein BLAST