Transcript Information: R_Transcript_340474.p1


Annotated TAIR IDAT2G28520.1
Annotated Gene Namevacuolar proton ATPase A1
Annotated Gene Symbol(s)VHA-A1
Annotation TypeOrtholog
Chromosome Positionchr2:12210026-12215532 | Forward length=817
E-Value2.7E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5101847989844
Replicate 20.80755001601146
Replicate 30.88102836908279
Condition 2: 8 Hour
Replicate 11.3184696510055
Replicate 22.580101750906
Replicate 32.9321832540625
Condition 3: 24 Hour
Replicate 11.7659851713618
Replicate 22.0358700514379
Replicate 33.8724400599895


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_340474.p1 GENE.R_Transcript_340474~~R_Transcript_340474.p1 ORF type:3prime_partial len:130 (+),score=23.00,V_ATPase_I|PF01496.15|2e-20 R_Transcript_340474:198-584(+)
ATGGAGTTCATAAACAACTTGTCGACAAGGGATCTTATGAGGTCCGAGAAAATGGCATTCGTTCAACTAATTATCCCTGTGGAATCAGCTCATTGTGCCATCTCTTACCTTGGTGAACTTGGCCTCCTCCAATTCTGCGAGTTAAATGCTGATAAGAGTCCCTTTCAGAGAACTTTCGTCAACCAGGTAAAACGATGTGCTGAGATGTCGAGGAAACTGAGATTTTTTAAAGACCAAATTGCTAAAGCTGGATTGCCTATTTCTGGAGATGCTGGAGTTCAACCAGATCTCAAGTTGGAAGAGTTGGAGATACAACTTGCTGAACATGAACATGAGCTCATAGAAATGAACTCAAACAGTGAGAGATTGCGGCAAACATATAATGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_340474.p1 GENE.R_Transcript_340474~~R_Transcript_340474.p1 ORF type:3prime_partial len:130 (+),score=23.00,V_ATPase_I|PF01496.15|2e-20 R_Transcript_340474:198-584(+)
MEFINNLSTRDLMRSEKMAFVQLIIPVESAHCAISYLGELGLLQFCELNADKSPFQRTFVNQVKRCAEMSRKLRFFKDQIAKAGLPISGDAGVQPDLKLEELEIQLAEHEHELIEMNSNSERLRQTYNE

Click here to download the sequence:
Link to NCBI Protein BLAST