Transcript Information: R_Transcript_340492.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.1525317071425
Replicate 20
Replicate 30.25522827405184
Condition 2: 8 Hour
Replicate 10.20461725582656
Replicate 20.24914631577923
Replicate 30.25280794735915
Condition 3: 24 Hour
Replicate 10.19184797126215
Replicate 20.12287052306728
Replicate 30.42677975712613


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_340492.p1 GENE.R_Transcript_340492~~R_Transcript_340492.p1 ORF type:5prime_partial len:359 (+),score=44.79,zf-RVT|PF13966.2|2.4e-17,RVT_3|PF13456.2|8.7e+03,RVT_3|PF13456.2|1.2e-16 R_Transcript_340492:2-1078(+)
TCCATGCAACTGTTTCGAAAAGATCAGGATGTACAACACAATAAAGCTTGGGACTTGATTTGGCGTATTCCGGTTTCCCAACGAGTGCGTATGTTCATATCGCTCCTTATGCATGATAGATTAATGACCAATGCCAATAGAGTTATTAGAGGCTTGTCTGATGACCCGAGGTGTCCTAGCTGTGGGGCGGATGAAGAGACCAGGGACCATATATTCCGCACCTACCCTCATGCTCGTGCACTTTGGAGGACTGTTAGCGCAGGGCCAATCCCTGATCGTTTTTGGACGCTGCATGTGGAAGAATGGCTGCTTGACAACCTTGACATCTATGACACTAAGCTAAAGGAGGATGACCCCTTGCGGTTTGCACTCACCCTACGGTGGTTATGGCGTTGGCGCAACTGTAGAATCTTTGGGCATGCTATGGACATACCTCAAGATATCCTAGCATTTCTCATGGCTCGTTTTCAAGAGCACAAAAAGGCTATGGGTTTCGATGAACTATTCTTTGGTAACACACTACCTAAACGAGTTGAAGTTCTCATTAGTTGGAAAACTCCTCCAGAAGGATGGTTGATGTTAAATTCTGATGGGGCGAGTAAAGGTAACCTTGGTCTTGCAGGGGGTGGTGGGGTTATTCGAGATTCTCGTGGCACCCTGGTTAAGGCTTTTTCAGAGAACTATGGGGTATGCTCAGTTTTAATGGCCGAAGCTTTGACAGTTTGGAAGGGCCTTCAATTAGCCAGAAGCCTCAACATCAAGAAATTGAAGGTTTGCCTTGATTCGAAGGTCATCATGCTTGGCATTAAGGAGGAAAGCAAGAGTGCTAGGCCAGTACGAAGAATTTTGTTAAACTGCAGAGAGCTCATCCTTCAACCGGAATGGTGTGTTGATATCAAGCATTGCTATAGAGAAGCTAACAGACCCGCTGACTGGTTAGCTAATGCTAGGGTAATGCAGTCAAGTAGAACACTGATCCTTGAAGACGTTCCCTCTGAGCTGCACAACCTGCTGATGGAAGACATTAGGGGAACAGCCATCTCTCGCTGGGTTCCTTCCAGTTCCTGCTTCACTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_340492.p1 GENE.R_Transcript_340492~~R_Transcript_340492.p1 ORF type:5prime_partial len:359 (+),score=44.79,zf-RVT|PF13966.2|2.4e-17,RVT_3|PF13456.2|8.7e+03,RVT_3|PF13456.2|1.2e-16 R_Transcript_340492:2-1078(+)
SMQLFRKDQDVQHNKAWDLIWRIPVSQRVRMFISLLMHDRLMTNANRVIRGLSDDPRCPSCGADEETRDHIFRTYPHARALWRTVSAGPIPDRFWTLHVEEWLLDNLDIYDTKLKEDDPLRFALTLRWLWRWRNCRIFGHAMDIPQDILAFLMARFQEHKKAMGFDELFFGNTLPKRVEVLISWKTPPEGWLMLNSDGASKGNLGLAGGGGVIRDSRGTLVKAFSENYGVCSVLMAEALTVWKGLQLARSLNIKKLKVCLDSKVIMLGIKEESKSARPVRRILLNCRELILQPEWCVDIKHCYREANRPADWLANARVMQSSRTLILEDVPSELHNLLMEDIRGTAISRWVPSSSCFT*

Click here to download the sequence:
Link to NCBI Protein BLAST