Transcript Information: R_Transcript_34122.p1


Annotated TAIR IDAT3G08950.1
Annotated Gene Nameelectron transport SCO1/SenC family protein
Annotated Gene Symbol(s)HCC1
Annotation TypeOrtholog
Chromosome Positionchr3:2727285-2729289 | Forward length=334
E-Value1.9E-133
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.5485142566592
Replicate 27.3426368507863
Replicate 38.341759933859
Condition 2: 8 Hour
Replicate 17.5014499549364
Replicate 28.4661142231078
Replicate 311.226718707407
Condition 3: 24 Hour
Replicate 112.407832230002
Replicate 212.366243424196
Replicate 312.145778323365


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34122.p1 GENE.R_Transcript_34122~~R_Transcript_34122.p1 ORF type:complete len:346 (+),score=63.53,SCO1-SenC|PF02630.10|1.8e-50,AhpC-TSA|PF00578.17|9.9e-09,Thioredoxin_8|PF13905.2|6e-06 R_Transcript_34122:82-1119(+)
ATGGCTGCCACAACCGCCATCTCACGAACTACTTCACGTAGATTCCTTGATTCCACTCTTCGTCAATGGAGATCCTATTTCGTTTCTTCCTCTTCTCCTTCTTTTTCACCTGAGCTTCCTTCTCACCTCTCCAACTCTATCCTCTACCGCTCTCTTCCTCTTCGCTATTCGGTGACTTTGAAAGGTAACGAAATTAAGCGCTTCGGATTATACGAAAGATTCCTGTGTACTACTGCTTCCACAACAAGAAGTGGTGCTGAAAACGGCGCTGCTTCTTCTTCTTCGTCGACGGATTCTGGTCAGAGTTCCGGTACGAAAAGCTCATCGAGTGGTGATGGCGGCAACTCTCAAGGTTCACATCAATCTCAATCTAGCGACTCCGGAAAACCTGTTCGAGGATCGCCTGTTTCATGGGTGAGCTTCTTTTTGTTGCTTGTTACTGGAGGAGGGATCATATACTACTATGACAGGGAAAAGAAACGACATATTGAAGAAATAAGCAATGCCTCAAATGCAGTAAGACAAGGACCATCTGTGGGACAAGCAGCTATTGGGGGGCCATTTAACTTAATCAACCATGATGGTAAAAAAGTGACTGATAAAGACTTCTTAGGTAAATGGACCGTGTTTTATTTTGGCTTCACACACTGTCCTGATATCTGCCCGGATGAGCTCCAAAAGCTTGCTGCTGCAGTTGATAAGATAAAAGAAAAATCTGGACTTGAAATTGTACCTGTCTTCATCTCCGTTGATCCTGAAAGAGACACTGTTGAGCAAGTCAGTGAGTATGTCAAAGAGTTCCATCCTAAGTTAATTGGATTAACTGGGGACCCTGAAGATATACAGAAGGTTGCTCGTGCATACAGAGTGTATTATATGAAGACAACAGAGGAAGGCTCAGATTACCTGGTCGACCATTCTATAGTCATGTACTTGATGAGCCCTGAGATGAAATTTGTCAAGTTCTTTGGAAAGAATAACGATGTTGAAGGACTTGCCGATGGCATAATCAAAGAGGTAAAGCAGTACAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34122.p1 GENE.R_Transcript_34122~~R_Transcript_34122.p1 ORF type:complete len:346 (+),score=63.53,SCO1-SenC|PF02630.10|1.8e-50,AhpC-TSA|PF00578.17|9.9e-09,Thioredoxin_8|PF13905.2|6e-06 R_Transcript_34122:82-1119(+)
MAATTAISRTTSRRFLDSTLRQWRSYFVSSSSPSFSPELPSHLSNSILYRSLPLRYSVTLKGNEIKRFGLYERFLCTTASTTRSGAENGAASSSSSTDSGQSSGTKSSSSGDGGNSQGSHQSQSSDSGKPVRGSPVSWVSFFLLLVTGGGIIYYYDREKKRHIEEISNASNAVRQGPSVGQAAIGGPFNLINHDGKKVTDKDFLGKWTVFYFGFTHCPDICPDELQKLAAAVDKIKEKSGLEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGDPEDIQKVARAYRVYYMKTTEEGSDYLVDHSIVMYLMSPEMKFVKFFGKNNDVEGLADGIIKEVKQYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST