Transcript Information: R_Transcript_34124.p1


Annotated TAIR IDAT3G08950.1
Annotated Gene Nameelectron transport SCO1/SenC family protein
Annotated Gene Symbol(s)HCC1
Annotation TypeOrtholog
Chromosome Positionchr3:2727285-2729289 | Forward length=334
E-Value5.8E-129
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.810059947137
Replicate 29.6760059147398
Replicate 312.281323169021
Condition 2: 8 Hour
Replicate 18.5553022104833
Replicate 210.035456007038
Replicate 310.825358141074
Condition 3: 24 Hour
Replicate 111.340603570312
Replicate 212.754848515033
Replicate 39.0979013457585


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34124.p1 GENE.R_Transcript_34124~~R_Transcript_34124.p1 ORF type:5prime_partial len:332 (+),score=60.61,SCO1-SenC|PF02630.10|1.6e-50,AhpC-TSA|PF00578.17|9e-09,Thioredoxin_8|PF13905.2|5.5e-06 R_Transcript_34124:1-996(+)
TTTCTTCCTCTTCGCTATTCGGTTCTCTCTCTCTCTCCCTTCGCAATTAGGTTTTCGTGTTTGCTGAATGTACTTAATGCGAAATCTCTTTCACTTCTCAGCTTGATTGATTTTCCCTCTCATTTTCAGGTGACTTTGAAAGGTAACGAAATCAAGTGGTTCGGATTACACGAGAGATTCCTGTGTACTACTGCTTCCACAATAAGAAGTGGTGCTGGAAACGGCGCTGCTTCTTCTTCATCGTCGACAGATTCTGGTCAGAGTTCCGCTACGAAAAGCTCATCGAGTGGTGATGGCGGCAACTCTCAAGGTTCACATCAATCTCAATCTAGCGACTCCGGAAAACCTGTTCGAGGATCGCCTGTTTCATGGGTGAGCTTCTTTTTGTTGCTTGTTACTGGAGGAGGGATCATATACTACTATGACAGGGAAAAGAAACGACATATTGAAGAAATAAGCAATGCCTCAAATGCAGTAAGACAAGGACCATCTGTGGGACAAGCAGCTATTGGGGGGCCATTTAACTTAATCAACCATGATGGTAAAAAAGTGACTGATAAAGACTTCTTAGGTAAATGGACCGTGTTTTATTTTGGCTTCACACACTGTCCTGATATCTGCCCGGATGAGCTCCAAAAGCTTGCTGCTGCAGTTGATAAGATAAAAGAAAAATCTGGACTTGAAATTGTACCTGTCTTCATCTCCGTTGATCCTGAAAGAGACACTGTTGAGCAAGTCAGTGAGTATGTCAAAGAGTTCCATCCTAAGTTAATTGGATTAACTGGGGACCCTGAAGATATACAGAAGGTTGCTCGTGCATACAGAGTTTATTACATGAAGACAACGGAGGAAGGCTCAGATTACCTCGTCGACCATTCTATAGTCATGTACTTGATGAGCCCTGAGATGAAATTTGTCAAGTTCTTTGGAAAGAATAACGATGTTGAAGGACTTGCCGATGGCATAATCAAAGAGGTAAAGCATTACAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34124.p1 GENE.R_Transcript_34124~~R_Transcript_34124.p1 ORF type:5prime_partial len:332 (+),score=60.61,SCO1-SenC|PF02630.10|1.6e-50,AhpC-TSA|PF00578.17|9e-09,Thioredoxin_8|PF13905.2|5.5e-06 R_Transcript_34124:1-996(+)
FLPLRYSVLSLSPFAIRFSCLLNVLNAKSLSLLSLIDFPSHFQVTLKGNEIKWFGLHERFLCTTASTIRSGAGNGAASSSSSTDSGQSSATKSSSSGDGGNSQGSHQSQSSDSGKPVRGSPVSWVSFFLLLVTGGGIIYYYDREKKRHIEEISNASNAVRQGPSVGQAAIGGPFNLINHDGKKVTDKDFLGKWTVFYFGFTHCPDICPDELQKLAAAVDKIKEKSGLEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGDPEDIQKVARAYRVYYMKTTEEGSDYLVDHSIVMYLMSPEMKFVKFFGKNNDVEGLADGIIKEVKHYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST