Transcript Information: R_Transcript_34128.p1


Annotated TAIR IDAT3G08950.1
Annotated Gene Nameelectron transport SCO1/SenC family protein
Annotated Gene Symbol(s)HCC1
Annotation TypeOrtholog
Chromosome Positionchr3:2727285-2729289 | Forward length=334
E-Value4.6E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74501881447832
Replicate 23.32084343319
Replicate 30.70122666110671
Condition 2: 8 Hour
Replicate 11.6240624709908
Replicate 21.597205845799
Replicate 31.5743743905438
Condition 3: 24 Hour
Replicate 10.81992168670372
Replicate 20.90021464859499
Replicate 32.1217672910768


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34128.p1 GENE.R_Transcript_34128~~R_Transcript_34128.p1 ORF type:complete len:196 (+),score=42.57,SCO1-SenC|PF02630.10|1.1e-50,AhpC-TSA|PF00578.17|2.2e-09,Thioredoxin_8|PF13905.2|1.8e-06 R_Transcript_34128:545-1132(+)
ATGACAGGGAAAAGAAACGACATATTGAAGGTACATCCCTATGAAATAAGCAATGCCTCAAATGCAGTAAGACAAGGACCATCTGTGGGACAAGCAGCTATTGGGGGGCCATTTAACTTAATCAACCATGATGGTAAAAAAGTGACTGATAAAGACTTCTTAGGTAAATGGACCGTGTTTTATTTTGGCTTCACACACTGTCCTGATATCTGCCCGGATGAGCTCCAAAAGCTTGCTGCTGCAGTTGATAAGATAAAAGAAAAATCTGGACTTGAAATTGTACCTGTCTTCATCTCCGTTGATCCTGAAAGAGACACTGTTGAGCAAGTCAGTGAGTATGTCAAAGAGTTCCATCCTAAGTTAATTGGATTAACTGGGGACCCTGAAGATATACAGAAGGTTGCTCGTGCATACAGAGTGTATTATATGAAGACAACAGAGGAAGGCTCAGATTACCTGGTCGACCATTCTATAGTCATGTACTTGATGAGCCCTGAGATGAAATTTGTCAAGTTCTTTGGAAAGAATAACGATGTTGAAGGACTTGCCGATGGCATAATCAAAGAGGTAAAGCAGTACAAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34128.p1 GENE.R_Transcript_34128~~R_Transcript_34128.p1 ORF type:complete len:196 (+),score=42.57,SCO1-SenC|PF02630.10|1.1e-50,AhpC-TSA|PF00578.17|2.2e-09,Thioredoxin_8|PF13905.2|1.8e-06 R_Transcript_34128:545-1132(+)
MTGKRNDILKVHPYEISNASNAVRQGPSVGQAAIGGPFNLINHDGKKVTDKDFLGKWTVFYFGFTHCPDICPDELQKLAAAVDKIKEKSGLEIVPVFISVDPERDTVEQVSEYVKEFHPKLIGLTGDPEDIQKVARAYRVYYMKTTEEGSDYLVDHSIVMYLMSPEMKFVKFFGKNNDVEGLADGIIKEVKQYKR*

Click here to download the sequence:
Link to NCBI Protein BLAST