Transcript Information: R_Transcript_34166.p1


Annotated TAIR IDAT4G33520.2
Annotated Gene NameP-type ATP-ase 1
Annotated Gene Symbol(s)PAA1, HMA6
Annotation TypeOrtholog
Chromosome Positionchr4:16118993-16125849 | Forward length=949
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.2184727153574
Replicate 25.2544809486719
Replicate 35.826945608908
Condition 2: 8 Hour
Replicate 16.3295078287936
Replicate 26.3789539340972
Replicate 37.7018162467553
Condition 3: 24 Hour
Replicate 17.3767619516413
Replicate 25.8602026712347
Replicate 36.9652942824421


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34166.p1 GENE.R_Transcript_34166~~R_Transcript_34166.p1 ORF type:complete len:971 (+),score=199.59,E1-E2_ATPase|PF00122.16|8e-53,Hydrolase|PF00702.22|5.2e-41,HAD|PF12710.3|6.1e-10,HMA|PF00403.22|5.2e-10 R_Transcript_34166:96-2915(+)
ATGGAGGCTTCTCTCTCACCTTCATCACTCCTTTCTCTCTCCAAAACCCTTCGCTCCTCCACTCGCTCTCTCCTCCACCATCACAACCACCCCCTCTCTCTCTCTCCATTGACTCGTTCCTTTACCAACCGAGTCTTGACTCGTCGATTACCTTCCGCCATTGACCTCTCTAAACTTACTTCTTCCACTTCTGTCCTCCGTCTTCGACCACTCATCTCCTCATTCCCTCCGATTCGATGCCTCTTGAGCTCGGCCGGCGGAGGTGGAGATGGAATTGGCGGCGGCGATGGTGGCGGCCGTGGTGACGGATCGGAAGGTGGAAATTCGAAGGTCGGAGCAGTTGACGATGTTTCGATGCTCTCGCCTGATGTTATTATACTCGATGTCGGGGGGATGACTTGTGGAGGTTGTGCTGCGAGTGTGAAGAGGATATTGGAGAGTCAACCTCAGGTGTCTTCCGCAAATGTCAATCTTGCGACAGAGACTGCTATTGTCTGGCCTGTGTCTGAAGCTAAGGTTGTGCCAAATTGGCAACAGGAGTTAGGAGAGATGCTTGCAAAACATCTGACCACTTGTGGTTTTCAGTCTAATCCTCGAGGTCCTGGAAGAGACAATTTGCTTAGAGTTTTTGAGAGAAAGATAGAAGATAAACGCATCCAATTGAAAGAAAGTGGCCGTGGACTTGCAGTATCTTGGGCTCTATGTGCTGTATGTATGCTTGGTCACCTGTCACATTTCTTTGGAGCTAAGGCGTCATGGATACATGCATTTCACTCCACAGGATTCCATTTATCTCTGTCCTTATTCACATTACTCGGACCTGGGCGACAACTAATAGTTGATGGTCTATGGAGTCTTTTTAGGGGTTCCCCCAACATGAACACTTTGGTTGGACTTGGAGCTTTATCATCCTTTTCTGTTAGCTCTTTGGCTGCATTCATCCCGAAGCTGGGGTGGAAGGCATTTTTTGAGGAACCGATCATGTTGATAGCCTTTGTTTTGTTGGGAAGGAATCTTGAGCAAAGAGCTAAAATTAAGGCAACTAGTGATTTGACTAACCTTTTGAGTATTTTACCATCAAAAGCTCGTCTCTTAGTTACTGTTGCTGAAGATACTGTATCAACTGTTGAAGTTCCATGTAGCAATCTGACAGTTGGAGATAAAATTGTGGTGCTACCCGGGGACCGTGTACCAGCTGATGGAATTGTCAGAGCTGGCAGAAGCACAGTTGATGAATCAAGCTTTTCTGGGGAGCCTTTGCCAGTGACAAAGCTACCTGGGGCTGAGGTTTCAGCAGGGAGTATAAACCTGAATGGAACCCTTACTATTGACGTAAGAAGGCCTGGTGGTGAGACAACAATGGGTGACATTGTCCGACTAGTGGGGGAGGCACAAAGTCGGGAAGCTCCTGTTCAGCGTTTGGCTGACAAGGTGGCTGGGCACTTCACTTATGGTGTGATGGCATTGTCTGCTGCTACATTTATGTTCTGGAACTTATTTGGCTCTCGGATTATGCCTTCTGCCTTTCTGGGGACAAGTTCCGTTTCTCTAGCCCTTCAGCTTGCTTGTAGCGTTCTAGTTGTGGCGTGTCCATGTGCTCTTGGCTTAGCCACACCAACTGCTGTGCTGGTTGGAACTTCACTTGGTGCAAAGAGGGGGTTACTTTTGCGTGGTGGAGATGTATTGGAGAAATTTTCAATGGCTAATGCAGTTGTTTTTGACAAGACAGGCACTTTGACCATTGGAAAACCTGTTGTGACAAAAGTACTCACTCTCGTTCATGAAACAGATAATTTGACAAATTTTGACTCAGACTATTTGTCAGAAGCCGAGGTATTAAAACTTGCAGCTAGTGTCGAGTCAAATACTATCCATCCAGTTGGGAAAGCTATAGTGGAAGCTGCTAGATCTGTTGGTGCCCTGAAGGTCAAAGCTGCTGATGGTTCCTTCTTGGAGGAGCCCGGATCTGGTGCTGTAGCAACCATTGGGACTAGAAGGGTTGCTGTTGGAACCTTGGAATGGCTTAGAAGGCACGGAGTCCAGGACAACCCGTTTCAAGAGTTGGAAGAACAAAGCAATCAGTCAGTTGTCTACATTGGAGCGGACGGAAATGTTGCTGGCCTTGTTTACATCGAAGATCAGTTAAGAGATGAGGCAAAAGAAGTTGTCCAATCTCTGTCCAGACAAGGGATAGAAGTGTACATGCTATCAGGAGATAAAAGAAATGCTGCCGAATATGTTGCCTCTATCGTAGGCATACCCAAGGACAAGGTCTTTTCTGGAGTAAAACCTGATCAAAAGAAGACATTCATAAGTGAACTCCAGAATAATAACATTGTCGCAATGGTTGGAGATGGGATCAACGATGCTGCTGCTCTGGCTTCATCACATGTTGGAGTTGCTATGGGTGGCGGTGTTGGAGCTGCCAGTGAGGTATCTTCGATTGTGCTGATGGGCAACCGACTTTCACAAGTACTCGATGCCCTAGAGCTCAGTAAATTGACCATGAAGACTATAAAGCAAAACCTCTGGTGGGCCTTTGGATACAACATCGTTGGACTCCCAATAGCTGCAGGAGTATTACTTCCATTTACTGGGATGATGCTGACTCCTTCAATTGCTGGAGCACTCATGGGTCTGAGTTCTATAGGGGTGATGTCAAATTCTTTGCTTCTGAGATTAAGATTTTCATCGAAGCAGACACGCCACTCTGAAACTTCGTTAAAAACTGAAGGCCAGTCACCCCTTGAAGTTGTAGTGGCTGAGAACGAGAAGTCAAAAGCCCCGTATTCGAGTTCTAGATTGAGAAATACGTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34166.p1 GENE.R_Transcript_34166~~R_Transcript_34166.p1 ORF type:complete len:971 (+),score=199.59,E1-E2_ATPase|PF00122.16|8e-53,Hydrolase|PF00702.22|5.2e-41,HAD|PF12710.3|6.1e-10,HMA|PF00403.22|5.2e-10 R_Transcript_34166:96-2915(+)
MEASLSPSSLLSLSKTLRSSTRSLLHHHNHPLSLSPLTRSFTNRVLTRRLPSAIDLSKLTSSTSVLRLRPLISSFPPIRCLLSSAGGGGDGIGGGDGGGRGDGSEGGNSKVGAVDDVSMLSPDVIILDVGGMTCGGCAASVKRILESQPQVSSANVNLATETAIVWPVSEAKVVPNWQQELGEMLAKHLTTCGFQSNPRGPGRDNLLRVFERKIEDKRIQLKESGRGLAVSWALCAVCMLGHLSHFFGAKASWIHAFHSTGFHLSLSLFTLLGPGRQLIVDGLWSLFRGSPNMNTLVGLGALSSFSVSSLAAFIPKLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDLTNLLSILPSKARLLVTVAEDTVSTVEVPCSNLTVGDKIVVLPGDRVPADGIVRAGRSTVDESSFSGEPLPVTKLPGAEVSAGSINLNGTLTIDVRRPGGETTMGDIVRLVGEAQSREAPVQRLADKVAGHFTYGVMALSAATFMFWNLFGSRIMPSAFLGTSSVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGAKRGLLLRGGDVLEKFSMANAVVFDKTGTLTIGKPVVTKVLTLVHETDNLTNFDSDYLSEAEVLKLAASVESNTIHPVGKAIVEAARSVGALKVKAADGSFLEEPGSGAVATIGTRRVAVGTLEWLRRHGVQDNPFQELEEQSNQSVVYIGADGNVAGLVYIEDQLRDEAKEVVQSLSRQGIEVYMLSGDKRNAAEYVASIVGIPKDKVFSGVKPDQKKTFISELQNNNIVAMVGDGINDAAALASSHVGVAMGGGVGAASEVSSIVLMGNRLSQVLDALELSKLTMKTIKQNLWWAFGYNIVGLPIAAGVLLPFTGMMLTPSIAGALMGLSSIGVMSNSLLLRLRFSSKQTRHSETSLKTEGQSPLEVVVAENEKSKAPYSSSRLRNTS*

Click here to download the sequence:
Link to NCBI Protein BLAST