Transcript Information: R_Transcript_341699.p1


Annotated TAIR IDAT3G60380.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT4G16790.1); Has 6102 Blast hits to 3981 proteins in 424 species: Archae - 6; Bacteria - 372; Metazoa - 2603; Fungi - 655; Plants - 291; Viruses - 28; Other Eukaryotes - 2147 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22316913-22319144 | Reverse length=743
E-Value1.3E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.0562135454931
Replicate 21.8144950977048
Replicate 33.6763899845677
Condition 2: 8 Hour
Replicate 12.720651660805
Replicate 22.4845424267984
Replicate 34.705973123804
Condition 3: 24 Hour
Replicate 13.117726907466
Replicate 24.0843072019588
Replicate 33.2426229165774


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_341699.p1 GENE.R_Transcript_341699~~R_Transcript_341699.p1 ORF type:5prime_partial len:81 (-),score=29.09,DUF761|PF05553.7|1.3e-10 R_Transcript_341699:164-406(-)
GGGGAGAAAAAGCAAGGAAGTGGTGGAACTTCTATCATATTGGGTTTGAACTCGAAGGAAAGCTCAAAGGGTAAAGTAGCTGCCCTTTGTGATGTTAAGGAGGAGGAAACTGATAACAACGAGATTGACAAGAAAGCAGACGAGTTCATAGCAAAGTTTAAGGAGCAGATTAGGCTTCAAAAGGTCAGTGCAGAGGCTGAATCGAGCAGGCAACAGCGTGCACATCAGAATTCTTTGTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_341699.p1 GENE.R_Transcript_341699~~R_Transcript_341699.p1 ORF type:5prime_partial len:81 (-),score=29.09,DUF761|PF05553.7|1.3e-10 R_Transcript_341699:164-406(-)
GEKKQGSGGTSIILGLNSKESSKGKVAALCDVKEEETDNNEIDKKADEFIAKFKEQIRLQKVSAEAESSRQQRAHQNSLW*

Click here to download the sequence:
Link to NCBI Protein BLAST