Transcript Information: R_Transcript_34173.p1


Annotated TAIR IDAT5G25360.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:8799934-8802333 | Reverse length=169
E-Value2.3E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 25.2490751040745
Replicate 32.8633421995191
Condition 2: 8 Hour
Replicate 15.2032463012896
Replicate 20.83853306904446
Replicate 36.1261685843806
Condition 3: 24 Hour
Replicate 11.4348629517315
Replicate 21.1027629445289
Replicate 33.830348320207


Fold Change




FASTA Sequences

Nucleotide Sequence

>R_Transcript_34173.p1 GENE.R_Transcript_34173~~R_Transcript_34173.p1 ORF type:complete len:80 (+),score=11.44,DUF4050|PF13259.2|0.011,DUF4050|PF13259.2|1.2e-11 R_Transcript_34173:72-311(+)
ATGAAGATTGATAGTTTTGCGTTTGTAGGTCTTCTTCTCTGGAACCAAATTCGTCTTCAGTGGATTGGAGCCACAAAGTCTTCGCTTCAGCATCATCAAACAAGGGGACCTGCAATCAGTCTAAATGCTACTTATGACAACTTGCTTAGCTCCAAGGAGCGTTTCCGCCGCCCCATCCCTTTGTCAGAAATGGTCGAATTTCTGGTTGACGTTTGGGAGCAGGAAGGATTATATGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>R_Transcript_34173.p1 GENE.R_Transcript_34173~~R_Transcript_34173.p1 ORF type:complete len:80 (+),score=11.44,DUF4050|PF13259.2|0.011,DUF4050|PF13259.2|1.2e-11 R_Transcript_34173:72-311(+)
MKIDSFAFVGLLLWNQIRLQWIGATKSSLQHHQTRGPAISLNATYDNLLSSKERFRRPIPLSEMVEFLVDVWEQEGLYD*

Click here to download the sequence:
Link to NCBI Protein BLAST